|
Name : metM (AFE_0473) Accession : YP_002424969.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 413065 - 414375 bp Length : 1311 bp Strand : + Note : identified by similarity to SP:P08499; match to protein family HMM PF00742; match to protein family HMM PF01113; match to protein family HMM PF01842; match to protein family HMM PF03447 DNA sequence : TTGGCTCCGGTACGGATCGGTATTCTCGGCATGGGCACTGTCGGCCAGGGGACGGTGCGGGTGCTGGAGCGCAATGCGGA AGAAATCACCCGTCGGGTCGGGCGGGAGCTACGGGTGGTCCATGCGGCGGTGCGTAATCCGGCGCGTCTGGAAGGATTGG GGCTGGATGCGCGGATCAGCAGCGATCCCTGGGCGGTGGTGCGCGATCCCGAGGTGGACGTGGTCGTCGAGGTGATGGGT GGGCAGGAGCCTGCCCTGAGCCTGCTGATGGCCGCTATCGCGGCGGGTAAACATGTGGTGACCGCCAACAAGGCACTGCT GGCCGAGCATGGCAACGAGATTTTCGCGGCGGCGCAGGCGCGGGGGGTGATGGTCGCCTTCGAGGCGGCGGTGGCGGGTG CCATTCCCATCATCAAGGCGATCCGCGAGGGGCTGGCGGGCAACCGGATTCAGTGGCTGGCGGGCATTATCAACGGCACC AGCAACTATATCCTCTCCCAGATGTTCCGCGAGGGCTGGGACTTTCAGCAGGCCCTGGCTGAAGCGCAGCGGCTGGGTTA TGCCGAGGCCGATCCGGGGCTGGATGTGGATGGCGGCGATGCCGCGCACAAGATTACCTTGATGGCGTCCATTGCTTTCG GTATTCCGGTGGATTTCGCCCATTGCCATGTGGAAGGCATCCGTGCGCTGGAACGGACGGATGTGGTCTATGCCGCCGAG CTGGGCTATCGCATCAAGTTGCTGGGTATTGCGCGGCGCCGCGCGGATGGCGTCGAGTTGCGGGTCCATCCGACCCTGAT TCCCCATAGCCACCTGCTGGCCAATGTGGAGGGACCCTTCAACGCGATTCTGGTGGAGAGCGATGCGGCGGGGCAGAGCC TTTATTATGGACGTGGCGCGGGCGGCGATCCCACGGCCAGCGCCGTGGTGGCGGACCTGGTGGATGTGGCGCGGACCATG ACCGCCGATCCCAGCAACCGGGTGCCCCATCTCGCCTTCCAGCCCGATGCCATGAGTGCCTTGCCGCTGCTGCCCATGGC CGAGGTGGAGAGCGCTTACTATCTGCGCATCCACGCCCATAACCGTGCCGGTGTGCTGGCACAGGTGGCGACGATGCTGG CGGAATATGAGATTTCCATCGAAGCGCTGGTACAGAAAGAGACGCCGGAGGCAGACAGTGTGCCCATCGTCCTGCTGCTC CACCGCTGCCGGGAAGGCGACCTGGAGCAGGCAATCGCTCGCATGGAAGCCCTGCCAGTGGTCGTTCAGCCCGTGCTGCG CCTGCGTGTCGAGAGTTTGGCGGAAGGGTGA Protein sequence : MAPVRIGILGMGTVGQGTVRVLERNAEEITRRVGRELRVVHAAVRNPARLEGLGLDARISSDPWAVVRDPEVDVVVEVMG GQEPALSLLMAAIAAGKHVVTANKALLAEHGNEIFAAAQARGVMVAFEAAVAGAIPIIKAIREGLAGNRIQWLAGIINGT SNYILSQMFREGWDFQQALAEAQRLGYAEADPGLDVDGGDAAHKITLMASIAFGIPVDFAHCHVEGIRALERTDVVYAAE LGYRIKLLGIARRRADGVELRVHPTLIPHSHLLANVEGPFNAILVESDAAGQSLYYGRGAGGDPTASAVVADLVDVARTM TADPSNRVPHLAFQPDAMSALPLLPMAEVESAYYLRIHAHNRAGVLAQVATMLAEYEISIEALVQKETPEADSVPIVLLL HRCREGDLEQAIARMEALPVVVQPVLRLRVESLAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 2e-92 | 54 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 2e-92 | 54 |
