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Name : tkt-2 (AFE_3252) Accession : YP_002427605.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2928732 - 2930723 bp Length : 1992 bp Strand : - Note : identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 DNA sequence : GTGACCCGTACTGATCTGGCGAACGCCATCCGCGTTCTCACCATGGACGCCGTGGAAAAGGCAAAATCCGGCCATCCCGG CATGCCCATGGGCATGGCGGACATCGCCGAAGTGCTGTGGAACGACTTTCTGGTCCACAACCCCGCCAATACCCATTGGG CCAACCGCGACCGCTTCATTCTGTCCAATGGACACGGCTCCCTCCTGCAGTACGCGCTCCTCCATCTCACCGGCTACGAT GTCTCCATGGAAGACCTCAAAAACTTCCGTCAGTGGCACAGCAAGACCCCCGGTCATCCGGAGTACCGCGACACTCCAGG CATTGAAACCACCACTGGCCCCCTGGGTCAGGGCCTTGCCAACGGTGTCGGAATGGCGCTGGCGGAGCGTATGCTGGCCA GTCACTTCAACCGCCCCGATCATGAAATCATCCATCACTACACGTATGTATTCCTCGGTGACGGCTGCCTCATGGAAGGC ATTTCTCATGAGGCCTGTTCCCTGGCGGGCGTCTGGGGGCTGGGCAAGCTCATCTGTTTCTACGATGACAACAACATCTC CATTGACGGTCATGTGGGTGACTGGTTCGCCGACAACACCCCGGCGCGTTTCGAGGCTTACGGCTGGCATGTGATCCGTC ACGTCGACGGACATGACCCCGAAGCCATCAAAATGGCCATCGTGGACGCCCGCAAGCAGACCGACAAGCCCACCCTGATC TGCTGCAAAACCGTCATCGGCCACGGCTCCCCCAACAAGGCCGGCAGCCATGACTGTCATGGCGCGCCTCTGGGTGCCGA AGAAGTCTGCCTGACCCGGGAAAACCTGGGCTGGTCCGCGGAGCCGTTCCAGATCCCCGAGGCCGTCTACCGCGCCTATG ATGCCCGGGCCAAAGGAGAGGCCGCGGAGGCCGACTGGAAGGCCCGTTTCGCCAAATACCGGGAACTCTATCCCGAAGAG GCGGCGGAGCTCGAGCGGCGCCTGGCCGGCACCCCCGCCAGCGATTTCGATGCGGCGGTGGCGGTGCTCATCGCCGATTT CCGTAAGACGGCGCCCAAAATCGCTACCCGCGTGGCATCCGGTCAGTGCATTCAGGCCCTTGCACCGAAGTTGCCCGAAT TTATCGGTGGTTCCGCCGACCTGACGCCTTCCAACAACACGCGCTGGAAGGAAGCCATCGACATCGGCCCCCATCGCCTG ATGGGCAACTACATCCACTACGGCGTGCGGGAATTCGGCATGTCCGCCATCATGAACGGCGTCGCTCTCTACGGCGGTTT CCTGCCCTTCGGCGGCACCTTCCTGATTTTCTCCGACTACAGCCGCAATGCGATCCGGATGTCGGCGCTGATGGGTATTC GCGTGATCTATGTGATGACCCATGACTCCATCGGTCTCGGCGAAGACGGCCCCACTCACCAGCCCATCGAGCAGGTCAAC AGCCTGCGTCTGATCCCCAACCTCCATGTCTGGCGCCCGGCGGATGCCGTGGAAACCGCCATCGCCTGGGAATCCTCGGT CAAACTGGAGCGGACGCCGTCCCTGCTGGCCCTCAGCCGGCAGAACCTCCCGGCGCTGCCCCACACCGACGAGACCGTGG CCAATGCCCGGCGCGGCGGCTATGTGCTCAAGGAGGCCGCAAACGGCAAGGCCGAGGGTATCCTGATCGCCACCGGCTCC GAAGTGGAGCTGGCGCTGGCGGCCCAGGCCAAACTGGCGGAGCAGGGACATCACGTGCGCGTGGTTTCCATGCCGTGCAT GAATATCTTTGCGGCGCAGGACGCGGCGTATCAGGAACGTGTCCTGCCAAGCAGCATCACCAAGCGTGTGGCCATCGAAG CGGGCACCACGGGGCTCTGGTACCGGTATGTGGGTCTGCACGGCGCGGTCATCGGCATCGACCACTTTGGCGCCTCGGCC CCGGCCCCGGTCCTGTTCGAGAAGTTCGGCTTTACGGCGGATAACGTCGTCGCGCACTTCCAGGCACTGTAA Protein sequence : MTRTDLANAIRVLTMDAVEKAKSGHPGMPMGMADIAEVLWNDFLVHNPANTHWANRDRFILSNGHGSLLQYALLHLTGYD VSMEDLKNFRQWHSKTPGHPEYRDTPGIETTTGPLGQGLANGVGMALAERMLASHFNRPDHEIIHHYTYVFLGDGCLMEG ISHEACSLAGVWGLGKLICFYDDNNISIDGHVGDWFADNTPARFEAYGWHVIRHVDGHDPEAIKMAIVDARKQTDKPTLI CCKTVIGHGSPNKAGSHDCHGAPLGAEEVCLTRENLGWSAEPFQIPEAVYRAYDARAKGEAAEADWKARFAKYRELYPEE AAELERRLAGTPASDFDAAVAVLIADFRKTAPKIATRVASGQCIQALAPKLPEFIGGSADLTPSNNTRWKEAIDIGPHRL MGNYIHYGVREFGMSAIMNGVALYGGFLPFGGTFLIFSDYSRNAIRMSALMGIRVIYVMTHDSIGLGEDGPTHQPIEQVN SLRLIPNLHVWRPADAVETAIAWESSVKLERTPSLLALSRQNLPALPHTDETVANARRGGYVLKEAANGKAEGILIATGS EVELALAAQAKLAEQGHHVRVVSMPCMNIFAAQDAAYQERVLPSSITKRVAIEAGTTGLWYRYVGLHGAVIGIDHFGASA PAPVLFEKFGFTADNVVAHFQAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 62 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 59 |
