Gene Information

Name : nusG (AFE_0314)
Accession : YP_002424817.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Unknown
Product : transcription termination/antitermination factor NusG
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 277064 - 277597 bp
Length : 534 bp
Strand : +
Note : identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922

DNA sequence :
ATGTCTATGCGTTGGTATGTGGTTCATGCGTTCTCGGGCTTCGAGAAAAAGGTGCAGGGCGAGATCCGCGAGCGTGCCAA
TCGGGAAGGGCTTGCCGACAAGTTTGGTGAGATCCTCGTTCCCGTCGAAGAAGTCGTGGAAATGCGAAATGGCCAAAAAA
CGAGCTCGCAGCGAATGTTTTACCCCGGTTATGTCTTGGTGCAGATGGAAATGGACGACGTGACCTGGCACCTCGTCAAG
AGCACACCACGGGTCACCGGATTTGTCGGCGGCTCTGTAGGGCGCCCACATCCGCTGAGTGATGCGGAGACCAACGCCAT
CATGGACCGCATCAAGGAAGGCGTTGAGAAGCCGCGTCCGAAATTCAGTTTTGACGCGGGTGAGCAGGTGCGTGTCGTAG
ATGGCCCGTTCAAGGATTTCAACGGCGTCGTCGAGGAAGTCAATTTCGAAAAGAGCAAGTTACGGGTTTCGGTGACCATC
TTTGGTCGCTCCACGCCCGTAGAATTGGATTTTGGCCAGGTCGAGAAGGCCTGA

Protein sequence :
MSMRWYVVHAFSGFEKKVQGEIRERANREGLADKFGEILVPVEEVVEMRNGQKTSSQRMFYPGYVLVQMEMDDVTWHLVK
STPRVTGFVGGSVGRPHPLSDAETNAIMDRIKEGVEKPRPKFSFDAGEQVRVVDGPFKDFNGVVEEVNFEKSKLRVSVTI
FGRSTPVELDFGQVEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 7e-53 54
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 7e-53 54