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Name : AFE_3030 (AFE_3030) Accession : YP_002427397.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Virulence Product : sugar isomerase, KpsF/GutQ family Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 2721063 - 2722049 bp Length : 987 bp Strand : - Note : identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGCCTGCCCTGAACGTGACGCCGGAAACTCTGCTCATGACCGGTCGCGATGTGCTGCGCCTGGAAGCTGCGGCAGTGGC GGCACTGGAGGAGCGCCTCGACGCAGATTTCGTGGGAGCATGTGAACTTCTGCTGAACTGCTCTGGCCGCATTGTCGTTA GTGGCATGGGCAAGTCCGGGATTATCGCCAAAAAAATCGCGGCGACCTTGGCCAGTACCGGCAGCCCCGCTCTTTTCCTG CATCCCGCCGAAGGCAGCCATGGTGATCTGGGTATGCTGACTCGTCAGGATTGTCTGCTCGCGCTCTCCAATTCCGGAGA GACCGCCGAACTCCTCGCTATTCTGCCGGTAGTCAAGCGCCTCGCGGTGCCGCTGCTTGCCATGACCGGTAATCCGCAGT CTACCCTGGCGCGAACCGCTGCTGTCCATCTCAACTGCAGTGTGGCGCGGGAGGCCTGCCCCCTCAATCTGGCACCGACG GCCTCGACCACGGCAAGCCTGGCCATGGGTGATGCCCTGGCCATGGCGATCCTGCAGGCCCGTGGCTTTTCGGCGGACGA CTTTGCCCTGTCCCATCCTGGCGGCAGCCTCGGCAAACGCCTGTTGCTGCGGGTTCAGGACGTTATGCACCGGGGTGATG CAATACCTCGTGTGGGGCTGGAGACACCGTTGCAGGATGCGATCCTGGAAATCAGCAGCAAGGGGCTGGGAATGACAGCG GTGGTCGATGCCGAAGACCGAGTGGTAGGAATTTTTACCGATGGCGATTTGCGTCGCGCCTTTGCCCAGCGTCAGAATCT TTGGGAGCAGCCCATGGCCGCGCTGGCGCATGCCCAACCGGCCACGATCGCCGCCGGAGCCCTTGCTGCCGAGGCCCTTG CACTGATGGAACATCATCGCATCGGCGCACTGCTGGTCACTGATAGCGGGGCACGGCTGATCGGCGCCCTGAATATGCAC GATTTGCTGCGCGCAGGTATCGTGTGA Protein sequence : MPALNVTPETLLMTGRDVLRLEAAAVAALEERLDADFVGACELLLNCSGRIVVSGMGKSGIIAKKIAATLASTGSPALFL HPAEGSHGDLGMLTRQDCLLALSNSGETAELLAILPVVKRLAVPLLAMTGNPQSTLARTAAVHLNCSVAREACPLNLAPT ASTTASLAMGDALAMAILQARGFSADDFALSHPGGSLGKRLLLRVQDVMHRGDAIPRVGLETPLQDAILEISSKGLGMTA VVDAEDRVVGIFTDGDLRRAFAQRQNLWEQPMAALAHAQPATIAAGALAAEALALMEHHRIGALLVTDSGARLIGALNMH DLLRAGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-44 | 46 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-44 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-44 | 46 |
