Gene Information

Name : ribE (AFE_0298)
Accession : YP_002424805.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Unknown
Product : riboflavin synthase subunit alpha
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0307
EC number : 2.5.1.9
Position : 268095 - 268751 bp
Length : 657 bp
Strand : +
Note : identified by similarity to SP:P50854; match to protein family HMM PF00677; match to protein family HMM TIGR00187

DNA sequence :
ATGTTTACCGGTATCATTCAGGCCTTGGGCCAGATTCGCGGGATGCAGGCACGGGATGGCGACCTGCGGATGATCGTTGC
CGCCGGAAGACTGGATCTCGCAGATGTCGGGTTGGGCGACAGCATTGCGGTTTCCGGCGCCTGCCTGACGGTGGTGGAAG
TCCAGCGCGACGCCTTCGCCGTCGATGTCTCCCGCGAAACCCTCAATAAAACCATTCTTGGACGTCTTCAGGTGGGCAGT
CCGGTCAATCTGGAAAAGGCCCTGCGACTGGCAGATCGCCTGGGAGGGCATCTGGTCGCTGGCCATGTGGACGGTGTCGG
ACAGATTCGCGAAGTGAGCGCCTCGGGACGCTCGCAGGTATTTGCCATCGCCGCACCTCCGGACCTGCTACGCTATGTTG
CCGCCAAAGGCAGCGTCTGTGTGGACGGTATCAGCCTGACCGTCAACGCGCTTCGAGGCGACCTGTTCATGCTCAATCTC
ATCCCCCACACCCTGGCGCAGACGACGGCCGCGCAGTGGCGGCCGGGGCAGTCCGTCAATCTGGAGGTGGACCTCATTGC
ACGCTATCTGGAACGCTGGGTGGCCACAGGCCCCGGGTCCGGGTTAAAATCAGCAGTCGATCGCGATTCACTCGCCGCAA
AAGGGTTTCCGGTATGA

Protein sequence :
MFTGIIQALGQIRGMQARDGDLRMIVAAGRLDLADVGLGDSIAVSGACLTVVEVQRDAFAVDVSRETLNKTILGRLQVGS
PVNLEKALRLADRLGGHLVAGHVDGVGQIREVSASGRSQVFAIAAPPDLLRYVAAKGSVCVDGISLTVNALRGDLFMLNL
IPHTLAQTTAAQWRPGQSVNLEVDLIARYLERWVATGPGSGLKSAVDRDSLAAKGFPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 9e-46 51
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 9e-46 51