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Name : xerD (AFE_2850) Accession : YP_002427220.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 2536180 - 2537088 bp Length : 909 bp Strand : - Note : identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225 DNA sequence : ATGCCTAGTGCCGGTCTGTCCGCCGAACGGCAGCGGATCGACACCTTTCTTGACGCCCTGTGGCTGGAAAAAAACCTTGG TGAAAATACCCTGACCGCTTATCGTCAGGATTTGCTGCAGGTAGCCGCCGCGCTCGCGGAGTGGGATTTGACCCTGACTA CCGCTGACGACGGCGCCCTGGCGCGCATACTGGGACAGAGGTTACAGTCCGGGGCCGCCCTGCGCTCCGTAGTCCGCCTG CTCTCCAGTGTGCGCCGTTTTTACGGTTACGCGGAGCGGGAGGGCTGGGTATCCCGTGACCCCAGTCGCAACCTGCAGAG TCCTCGTATCGGCCGCGTACTACCCCACGTTCTCAGCGAAACGGAAATAGAGGCCCTGCTGGCGGCCCCCGATTGTACCC ACCCGTTGGGCCTGCGTGACGCAGCCATGCTGGAACTGATGTACGCCTGCGGTTTGCGGGTATCGGAACTGGTGAATCTG GAGACGCGCCAAGTGGACCTCAGCGCCGATATGGTGGTGGTCTTTGGCAAGGGTCGCAAGGAACGCTTGGTGCCCATGGG AGAAGTGGCGGCCGGCCGCGTGACCCAGTATCTGCAGATGGGTCGCCCGCAGATACTGGGTCAGCGCATCAGTGCCGCCC TTTTTGTGACTGGGCGGGGGGCTGCCATGACGCGCCAGCGTTTCTGGCAAAACATTGAACGTTACGCCCGGTCTGCGGGA ATCACTCAGACCGTATCGCCGCACAGCCTGCGTCACGCCTTTGCCACCCACCTGCTGAATCACGGCGCGGACCTGCGCAG TGTGCAGTTGATGCTGGGACACGCCGCCCTGTCCACCACGGAGATATATACCCATGTGGCGCAGGCGCGGCTCAAGGCGC TGCACGCGAAGCATCACCCGCGCGGGTGA Protein sequence : MPSAGLSAERQRIDTFLDALWLEKNLGENTLTAYRQDLLQVAAALAEWDLTLTTADDGALARILGQRLQSGAALRSVVRL LSSVRRFYGYAEREGWVSRDPSRNLQSPRIGRVLPHVLSETEIEALLAAPDCTHPLGLRDAAMLELMYACGLRVSELVNL ETRQVDLSADMVVVFGKGRKERLVPMGEVAAGRVTQYLQMGRPQILGQRISAALFVTGRGAAMTRQRFWQNIERYARSAG ITQTVSPHSLRHAFATHLLNHGADLRSVQLMLGHAALSTTEIYTHVAQARLKALHAKHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 5e-54 | 47 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 5e-54 | 47 |
