|
Name : AFE_2505 (AFE_2505) Accession : YP_002426886.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : transposon transposition protein B Function : - COG functional category : - COG ID : - EC number : - Position : 2229241 - 2231121 bp Length : 1881 bp Strand : - Note : Structure resembles Tn7; identified by similarity to SP:P13989; match to protein family HMM PF00665 DNA sequence : ATGGCTAAGCCAGCCCGACAAACGTTTCTGCCAGCGCCAGGAAAGATGGTGATGACCTCCGGAAAGATTTATCGCATCAC TGAAGTGCTGGATTTGGAAACCGTCATTGGGTTGGATGTGGAGTCTGCCCGGAGTTGCACCCTGCGTATCGCTGACTTGG CACCTGCGGCGGATGGCACCGTAATGGTTCGTGATCTGGATACCATTGCCGACGAAGATTGGAAGACGGCGCAATCCCGA TATGCAGCGATACAACCGCTTCTGGACCGATTTGACGTGGGGCGGCGTGAGGTAGAGGCTCGAGCTCAAGAAGTGGGAAT CAATTTCACCACGCTTTACCGTTGGCTGAAGCTATATCGGGATGCGGGAACTCTTGACGGGCTCATGCCGGAGAAAAGAG GTGTCAGGAGGGGTGCCAAGAAAATATCGGTCCATGCGGAACAGATCATTCAGGACGTTATCAGTGTGCTGTATCTGACT GTGCAGCGGCCCTCCGTTCAGAAGGTAGTTTTGGAGGCGCGCCGACGGTGTATTGAAGCGCAACTCACTGAGGTACCGCA CCCGAACACGGTACGTGCCAGGGTCGCGGAGATTAGTGAACGTGAGACGCTACGCAAGCGGGGATATCGTGAGAAGGCCA AGAACAAGTTCATTCCTGTCCCCGGTCAGTTCCCCAACGCGGATTATCCACTGGCTGTTGTGCAGATAGACCACACACCC GCAGATATTATTTTGGTTGACGATATTTATCGCAAACCCATTGGCCGCCCCTATATTACTATGGCAATAGATGTGTTTAG TCGCATGGTCGTTGGCTACTATCTGTCCTTTGACGCACCTTCGGTAACCTCTGTGGGGATGTGCGTGGCGCAAGCTATTC TTCCCAAAGATGATTGGTTGGTCTTGCATAAGGTCGATGCAAAATGGCCAGTGTCTGGTCTAATGACGACCATTCATGTG GATAATGGATCGGATTTCCGCTCGGAAAGCTTCCGCAATTCCTGCATGATGTACAATATTCGTCTGGAATACCGACCGGT AAAGCAGCCCCGCTATGGCGGTCACATCGAACGTTTATTGGGCACCATGCTGAAAGAGATCCATGATCTACCCGGAACTA CGTTCTCGTCGATAAAGGAACGGGACGAATACGACTCCGAGAAGCACGCTACGATGACCAAGTCGGAATTTGAAACATGG CTGGTTACCCTTATTTGCAAGGTGTACCACAAGCGACTTCATTCTTCCATCGGTATGACGCCCGAGAAAAAATGGGAACT GGGTATCTTCGGGGATAAAAACACCCCGGGCCGTGGAATGCCCGCGTTACCTGCGAATCGTGAGGTATTGTTATTGGACT TTTTGCCAATGTTCAAGCGGACTATTCAGGCGGATGGTGTTTCCGTAGATGGACTGACCTATTATGCGGACGTTATCCGG CAGTGGATCAATGCGGATGACCCGGACACCCCCGGTAAAAAGCGGCAATTCATTTTCCGCCGTGATCCCCGTGATATCAG CGTGATCTGGTTCCATGATCCTGAGTTAAAAATGTATTTTCGCATCCCATACGCGGATCAGACGATACCGAGCATGAGTA TCTGGGAGTACCAGCAGGCGGTAAGCCGCGCTCGTCAGCAGGGTATGAAATCTGTGGATGAGGCCATGGTGCTCCAAGCC TTGAATGATCTGCGGCAACAGGTCGATGGCTCGTCGGAAAGGACGAAAAAGGCGCGTCGCCAACAGCAAAAGCGCAAGGA ACACGCGAAAAAGGTATCTCCATCACAGCCGCTGACTTCAAATAGAAGCGTATTGGAGAAAGCGGCCCCTGCCTCGATGT TGCTGAAAGGCGTTGTTAAGCCATTGGATGATATTGCATGA Protein sequence : MAKPARQTFLPAPGKMVMTSGKIYRITEVLDLETVIGLDVESARSCTLRIADLAPAADGTVMVRDLDTIADEDWKTAQSR YAAIQPLLDRFDVGRREVEARAQEVGINFTTLYRWLKLYRDAGTLDGLMPEKRGVRRGAKKISVHAEQIIQDVISVLYLT VQRPSVQKVVLEARRRCIEAQLTEVPHPNTVRARVAEISERETLRKRGYREKAKNKFIPVPGQFPNADYPLAVVQIDHTP ADIILVDDIYRKPIGRPYITMAIDVFSRMVVGYYLSFDAPSVTSVGMCVAQAILPKDDWLVLHKVDAKWPVSGLMTTIHV DNGSDFRSESFRNSCMMYNIRLEYRPVKQPRYGGHIERLLGTMLKEIHDLPGTTFSSIKERDEYDSEKHATMTKSEFETW LVTLICKVYHKRLHSSIGMTPEKKWELGIFGDKNTPGRGMPALPANREVLLLDFLPMFKRTIQADGVSVDGLTYYADVIR QWINADDPDTPGKKRQFIFRRDPRDISVIWFHDPELKMYFRIPYADQTIPSMSIWEYQQAVSRARQQGMKSVDEAMVLQA LNDLRQQVDGSSERTKKARRQQQKRKEHAKKVSPSQPLTSNRSVLEKAAPASMLLKGVVKPLDDIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tniA | AFV47989.1 | transposase TniA | Not tested | delta-AbaR25 | Protein | 2e-111 | 42 |
| BJAB07104_00242 | YP_008207707.1 | Transposase-like protein | Not tested | AbaR25 | Protein | 2e-111 | 42 |
| ABK1_0235 | YP_005512807.1 | transposase | Not tested | AbaR4d | Protein | 3e-111 | 42 |
| BJAB0868_00249 | YP_008211575.1 | Transposase-like protein | Not tested | AbaR26 | Protein | 3e-111 | 42 |
| BJAB0868_00274 | YP_008211600.1 | Transposase-like protein | Not tested | AbaR26 | Protein | 3e-111 | 42 |
| ABZJ_00231 | YP_005524187.1 | transposition protein B | Not tested | AbaR22 | Protein | 3e-111 | 42 |
| tniA | AFH57198.1 | putative transposase | Not tested | AbaR4a | Protein | 2e-111 | 42 |
| ABTW07_0226 | YP_005797113.1 | transposition protein B | Not tested | AbaR4e | Protein | 3e-111 | 42 |
| tniA | AFV47944.1 | transposase TniA | Not tested | AbaR25 | Protein | 2e-111 | 42 |
| tniA | AEO37449.1 | TniA transposase | Not tested | AbaR4 | Protein | 3e-111 | 42 |
| tniA | AFV47961.1 | transposase TniA | Not tested | AbaR25 | Protein | 2e-111 | 42 |
| tniA | AEQ20900.1 | transposase | Not tested | Tn6166 | Protein | 3e-111 | 42 |
| tniA | AFV47975.1 | transposase TniA | Not tested | delta-AbaR25 | Protein | 2e-111 | 42 |
| tniA | AEZ06028.1 | transposase | Not tested | Tn6167 | Protein | 3e-111 | 42 |
| tniAb | AFV47958.1 | transposase TniAb | Not tested | AbaR25 | Protein | 9e-111 | 42 |
| ABK1_0251 | YP_005512823.1 | transposase | Not tested | AbaR4d | Protein | 1e-110 | 42 |
| ABZJ_00250 | YP_005524206.1 | putative transposase | Not tested | AbaR22 | Protein | 1e-110 | 42 |
| BJAB07104_00270 | YP_008207735.1 | Transposase-like protein | Not tested | AbaR25 | Protein | 8e-111 | 42 |
| BJAB0868_00256 | YP_008211582.1 | Transposase-like protein | Not tested | AbaR26 | Protein | 5e-111 | 42 |
| BJAB07104_00249 | YP_008207714.1 | Transposase-like protein | Not tested | AbaR25 | Protein | 3e-111 | 42 |
| tniAb | AEZ06043.1 | transposase | Not tested | Tn6167 | Protein | 1e-110 | 42 |
| tniA | CAJ77011.1 | Transposase | Not tested | AbaR1 | Protein | 7e-111 | 41 |
| tniA | ADZ05760.1 | transposase | Not tested | AbaR11 | Protein | 7e-111 | 41 |
| tniA | AFC76426.1 | TniA transposase | Not tested | AbaR5 | Protein | 9e-111 | 41 |
