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Name : AFE_2504 (AFE_2504) Accession : YP_002426885.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : transposon transposition helper protein C Function : - COG functional category : R : General function prediction only COG ID : COG2842 EC number : - Position : 2228357 - 2229241 bp Length : 885 bp Strand : - Note : Structure resembles Tn7; identified by similarity to SP:P05846; match to protein family HMM PF05621 DNA sequence : ATGGACCTTACTCATATTCATCCGGAATTCCGCCATATTTTGGGCATGTCGGATAAGGACCGCATGGCATTTCTCGACGA GCCGCGCTGGATAGGTTACGCCCAGGCTAATCGCCTTTTGGATAACTTGCGCAGTTTAATGGAAAAGCCCGTGCGCCCAC GTATGCCTAATCTGTTGATCGTTGGTGATTCCAACAATGGCAAGACAACGGTTATTCGGCGTTTTCAGAAGTTGCATGGA GAGGGCTACGTTAATGAGGATGCGGAACCCGTCAAACCGGTTATTGTAAGCGAAGCGCCGCCCAGCGCGGACGAAAAGGG GTTGTATATAGCGATCCTGGAGCGTTTCTGGACACCGTACCGAGCGACGGATTCTGCTTCTAAGCTGCGCTACCAGGTGG TTCATCTGATGCGAGACTGCCATGTGCGTATCCTGGTTATCGACGAATTTCACTCTCTCCTGACGGGGACGGTGACTAAA CAACGCGAGGTCATGAACGCCATCAAGCTGCTATGCAACGAATTGGCGATCCCCATCGTTGGCGTGGGCATCAGAGAGGC CGTCCGGGTTTTGCACACGGACCCACAGCACGCCAGCCGCTTTGATGTGGTCACGTTGCCGCCTTGGGAATTGAATCCAG AGTTTCAGCAACTGGTAGCGAGTTTTGAACGAGTATTACCACTCAAAAAGCCCTCTTTGTTACATCAAAGCGAGACGGTA AGTCTGCTTTTCGCCATTTCCGAAGGAAATCTTGGGAATCTCCATCGGCTTTTGGTGGAGTGTGCGGTGGAAGCCATTAA AACGGGTACGGAGAAAATCGACAAATCGATCATAGAGGGGAAGCAATGGCTGCGGCCTACGCATGGCATTCGGGAACTGG TGTAG Protein sequence : MDLTHIHPEFRHILGMSDKDRMAFLDEPRWIGYAQANRLLDNLRSLMEKPVRPRMPNLLIVGDSNNGKTTVIRRFQKLHG EGYVNEDAEPVKPVIVSEAPPSADEKGLYIAILERFWTPYRATDSASKLRYQVVHLMRDCHVRILVIDEFHSLLTGTVTK QREVMNAIKLLCNELAIPIVGVGIREAVRVLHTDPQHASRFDVVTLPPWELNPEFQQLVASFERVLPLKKPSLLHQSETV SLLFAISEGNLGNLHRLLVECAVEAIKTGTEKIDKSIIEGKQWLRPTHGIRELV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tniB | AFV47962.1 | transposition protein TniB | Not tested | AbaR25 | Protein | 4e-63 | 49 |
| BJAB07104_00250 | YP_008207715.1 | putative ATPase, putative transposase | Not tested | AbaR25 | Protein | 5e-63 | 49 |
| tniB | AFV47990.1 | transposition protein TniB | Not tested | delta-AbaR25 | Protein | 4e-63 | 49 |
| BJAB0868_00257 | YP_008211583.1 | putative ATPase, putative transposase | Not tested | AbaR26 | Protein | 5e-63 | 49 |
| ABZJ_00232 | YP_005524188.1 | putative transposition helper protein | Not tested | AbaR22 | Protein | 5e-63 | 49 |
| tniB | AEO37450.1 | TniB transposition protein | Not tested | AbaR4 | Protein | 5e-63 | 49 |
| tniB | AFC76427.1 | TniB | Not tested | AbaR5 | Protein | 5e-63 | 49 |
| 1_17 | CAJ77012.1 | Transposition Helper | Not tested | AbaR1 | Protein | 4e-63 | 49 |
| tniB | ADZ05761.1 | transposition helper protein | Not tested | AbaR11 | Protein | 4e-63 | 49 |
| tniB | AFH57218.1 | putative transposase | Not tested | AbaR4c | Protein | 4e-63 | 49 |
| ABZJ_00251 | YP_005524207.1 | putative transposition helper protein | Not tested | AbaR22 | Protein | 5e-63 | 49 |
