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Name : kdpB-1 (AFE_2474) Accession : YP_002426857.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 2205369 - 2207438 bp Length : 2070 bp Strand : - Note : identified by similarity to SP:P03960; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 DNA sequence : ATGGAATCTACCCATCATAAACATGCGGCATCTCCGATCAACTGGAAAGATCAGGGCCGGGGCGCCCTGTGGGACAGCTT CAGCATGCTCTCCCCGCGTCGCCAGTTGCGCAATCCGGTGATGTTCGTCGTCTACGTCGGCTCCTGGCTGCTGCTGGCCC TCTTTTTTCACGATCTAATCGTGCATAACAGTGAAGCGCCTTTTACCGCTGTGATCGACCTCTGGCTCTGGCTCACACTG ATTTTTGCCAATTTTGCCGAAGCGCTGGCCGAGCGTCAGGGCGAGGCCCAGGCCAACAGTTTGCGGCAGAGCCGGCAGGA AGTTACGGCCAAAAAACTGCCGAAACCGGTGCGCGAGGCGAGCTATAAGGAGGTTCCCGGCGCCAGCCTGCGCAGCGGCG ACTTTGTCCTGATAGAAGCGGGAGACCTCGTCCCCACCGACGGCGAGGCGGTGGCGGGAGTCGCCGCCGTCGATGAAAGC GCCATCACGGGCGAGAGCGCGCCCGTCATCCGCGAAAGCGGGGGTGATCGTAGCGCGGTCACCGGCGGTACCCGGGTGAT CTCGGACTGGCTCATCATCCGGGTGACGCAGGAGGCCGGACACACCTTCCTCGACAAAATGATCGCCATGGTGGAGGGGG CATCGCGACGCAAAACCCCTAACGAAATCGCTCTAAGCATACTGTTGGTCGTTTTGACGCTCGTTTTTCTGGTGGTCACC GTCACCATTTATCCGTTTTCCTGGTATAGCGTCCATTACGCCAGCCACTCCGGATCGGTGATCAGCCTGACGGTGCTGGT AGCCTTGCTGGTCTGCCTGATTCCCACCACCATCGGAGCGCTATTACCCGCTATCGGTATTGCCGGCATCGTGCGCTTGC TGCAGAGCAATGTGGTGGCGACTTCCGGGCGTGCCATCGAGGCGGCGGGTGACGTGGATGTGCTGCTTCTCGATAAAACC GGCACCATTACCTACGGCAACCGATCCGCAGCGGCGTTTTACCCCGTTTTAGCGGTTACCCAGGAAATCCTCGCGCAGGC GGCCCGCCGCGCCTCTTTGGCCGATGAGACGCCGGAGGGCAAAAGTATCGTGACCCTTGCCGACAAACATTACCCGCAAA GCCGGGAAGCCTTGCCACTGGAAGCCCAATTGATCCCTTTTACTGCCGAAACCCGCATGAGTGGGGTGGACTGGAATGGG CAGCAATTGCGTAAGGGATCTCCCGACGCCATGAAGGCGTGGGTCCAGTCGCTGGGGGGCACCTGGCCTAACGAGCTGGA CGGCATAGTGCAGGAAATCGCGGGGGGTGGCGCAACACCCCTGGTGGTCTGCTCTGGCGCAGCGGTATTGGGTGCCATCG AGTTGCGGGACATCGTCAAAGCCGACATCAAATCGCGCTTTGCCGAATTGCGGGCGATGGGTATCCGCACCGTCATGGTG ACCGGCGACAATCCGTTGACTGCCGCCGCCATTGCCGCTGAAGCGGGGGTCGATGATTATCTCGCGGAAGCCAAACCGGA AACCAAGCTCGCGCGCATTCGAGAATACCAGAATGAGGGTTACATGGTCGCGATGACCGGGGACGGCACCAACGATTCCC CAGCCCTGGCCCAGGCGGATGTCGGTCTCTGCATGGCCAGTGGTACCCAGGCGGCGCGCGAAGCCTCCAACATGGTCGAC TTGGACTCCAATCCCACCAAACTGCTGGAGATCGTCCAGATCGGCAAGCAACTGCTGATGACCCGCGGCGCCCTCACCAC CTTCAGTGTGGCGAACGATGTGGCCAAATACTTCGCCATCATCCCGGCGGCGTTTGTATCGACTTATCCCCAATTGGGCG AGCTGAACATCATGGATTTGAGCTCGCCTACCCATGCCATCATGGCCGCAGTCATCTTTAACGCGCTCATCATCCCCTTT CTGATTCCACTGGCCCTCAAGGGGATCAAGTTCCGCGCGGACTCGGCGCAGCACATCCTGCGCCGCAACGTGTGGATCTA CGGATTGGGCGGCATTATTGCGCCATTTATCTTCATCAAGCTGATCGACATGCTGCTGGTTGTACTGTAG Protein sequence : MESTHHKHAASPINWKDQGRGALWDSFSMLSPRRQLRNPVMFVVYVGSWLLLALFFHDLIVHNSEAPFTAVIDLWLWLTL IFANFAEALAERQGEAQANSLRQSRQEVTAKKLPKPVREASYKEVPGASLRSGDFVLIEAGDLVPTDGEAVAGVAAVDES AITGESAPVIRESGGDRSAVTGGTRVISDWLIIRVTQEAGHTFLDKMIAMVEGASRRKTPNEIALSILLVVLTLVFLVVT VTIYPFSWYSVHYASHSGSVISLTVLVALLVCLIPTTIGALLPAIGIAGIVRLLQSNVVATSGRAIEAAGDVDVLLLDKT GTITYGNRSAAAFYPVLAVTQEILAQAARRASLADETPEGKSIVTLADKHYPQSREALPLEAQLIPFTAETRMSGVDWNG QQLRKGSPDAMKAWVQSLGGTWPNELDGIVQEIAGGGATPLVVCSGAAVLGAIELRDIVKADIKSRFAELRAMGIRTVMV TGDNPLTAAAIAAEAGVDDYLAEAKPETKLARIREYQNEGYMVAMTGDGTNDSPALAQADVGLCMASGTQAAREASNMVD LDSNPTKLLEIVQIGKQLLMTRGALTTFSVANDVAKYFAIIPAAFVSTYPQLGELNIMDLSSPTHAIMAAVIFNALIIPF LIPLALKGIKFRADSAQHILRRNVWIYGLGGIIAPFIFIKLIDMLLVVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-166 | 60 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-166 | 60 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-141 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-141 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-141 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-141 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 5e-141 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-143 | 56 |
