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Name : AFE_2470 (AFE_2470) Accession : YP_002426853.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : ISAfe4, transposase orf3 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 2201515 - 2203152 bp Length : 1638 bp Strand : + Note : identified by match to protein family HMM PF03050 DNA sequence : ATGATTTCAGCGCCGCAAACGCCTCTTCCCACCAGCCCGGACGCCCTGCGCGATCTGGTGCTGAGCCTGCTGCAACAGCA GGAGGAACAGGAAGCGGAACGCACCCGGATCATCGCCCAACAGCAAGCGGCCATTGCCCTGCGCGATGAAACCATCGCCC GCCTGGAAAGCACCATCGCCAAACTGCAGCGCTGGCGATTCGGACGCCGTTCGGAAAAGCTCTCTCCCGACCAGATCAGT CTTTGGGAAGAATCGCTGGATACCGAAATCGCGGCGATGGAAAGCCTCCTCGAAACCGTTCTGGAAGACAGTGCGGCCGT GACCGCTGGCCGTGCAGAGGGAGCAGCCGCCGACGCGCAGACCGTAACGGTCCCCGCCCGTCCCGTACGCCGGCACCCCG GCCGCATGGCGATCCCCGCCCATCTGCCCCGGGTAGAAGTACGTCACGATCCCAAGACTTGCACTTGCGCGCAATGTGGG GGTCCACTCGAAACTGTCGGGGAAGAGATCAGCGAAAAACTGGATTATATCCCCGGACGCTTCCAGGTGATTCGCCATAT CCGCCCCAAACTGGCCTGCCGCCCCTGTGGTACCATCGAAAGTCCGGCATTACCGGCACAGGTGATTGACAAGGGCTTGC CCACGGCGCGCCTGGTGGCCCATGTGATGACGGCGAAACACGTGGATCACCTGCCTTTGTACCGGCAGGGAACCCAGTAC CAGCGAGCGGGCGTACCGATCTCTCGCGCCACCCTCTGCAGCTGGCTGGGTCAGGGCGAATACTGGATCAGTCTGCTCGC CGAAGCTTGCAAAATGGCCTTACTGGAAGGAAAGATTCTGCACGCCGACGAGACGCCCTTGCCCGTCCTCAACCCCGGCA GCGGCAAGACGGACAAAGCCTATCTCTGGGTGTATCGCAGCCAGGCGGATGCCCCGCATCCCGTCGTGGTCTTTGATTAT GCCCCGGACCGTAAGGGGATCCACGCGCAACACTTCCTGGGCGACTGGCAAGGCATCCTCCAGACCGATGACTATGGGGG GTATGATGCCCTCTACCGCAAGGAACAGATCATCGAAGCCGGATGCTGGGCGCATGTACGCCGCCACTTCTATGACGTGG AACAGCGCGGTCCCAGTCCGGTAGCCCAGAAAGCCCTGGCCTGGATCGTCAAACTCTACGCCATCGAAGCGGAGATCAAG GAATCTCTACCAGATCAGAAAGTCGCCGCCCGGCAGCAGCGTGCCGGTCCCCTGCTGGAAGCCTTCCATGCCTGGCTCAC GGAAACCCAGATGCAGGTGGCGCCGAAAAGTGGTATTGCCAAAGCGATGGCCTATGCCCTCAACCGTTGGAAAGCACTGA CGCTCTACCTCGAAGAAGGACAACTCAGCATCGATAATAATCCGGTGGAGCGGGCGCTGCGGGGCGTGGCCATTGGTCGC AAGAATTTTTTATTTGTTGGAAATGATGCGGGTGGTGAACGTGCCGCGTCCTTCTACAGCATTATCGAAACGTGCAAACT CAACGGCGTCGAGCCCTTCGCTTACCTCTGCGATGTGCTGGAAAAGCTCCCGACCTGGCCCAACAAGCGGCTCCACGAAC TTTTGCCGTGGAACTGGAAAAAAACCGCATTACCCTGA Protein sequence : MISAPQTPLPTSPDALRDLVLSLLQQQEEQEAERTRIIAQQQAAIALRDETIARLESTIAKLQRWRFGRRSEKLSPDQIS LWEESLDTEIAAMESLLETVLEDSAAVTAGRAEGAAADAQTVTVPARPVRRHPGRMAIPAHLPRVEVRHDPKTCTCAQCG GPLETVGEEISEKLDYIPGRFQVIRHIRPKLACRPCGTIESPALPAQVIDKGLPTARLVAHVMTAKHVDHLPLYRQGTQY QRAGVPISRATLCSWLGQGEYWISLLAEACKMALLEGKILHADETPLPVLNPGSGKTDKAYLWVYRSQADAPHPVVVFDY APDRKGIHAQHFLGDWQGILQTDDYGGYDALYRKEQIIEAGCWAHVRRHFYDVEQRGPSPVAQKALAWIVKLYAIEAEIK ESLPDQKVAARQQRAGPLLEAFHAWLTETQMQVAPKSGIAKAMAYALNRWKALTLYLEEGQLSIDNNPVERALRGVAIGR KNFLFVGNDAGGERAASFYSIIETCKLNGVEPFAYLCDVLEKLPTWPNKRLHELLPWNWKKTALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 4e-89 | 46 |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 2e-91 | 43 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 1e-84 | 43 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 4e-91 | 42 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 5e-92 | 42 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 4e-91 | 42 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 4e-92 | 42 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-92 | 42 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 4e-92 | 42 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 6e-92 | 42 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 2e-92 | 42 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 2e-92 | 42 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 3e-92 | 42 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 2e-92 | 42 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 3e-92 | 42 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-82 | 41 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 4e-84 | 41 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 4e-84 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AFE_2470 | YP_002426853.1 | ISAfe4, transposase orf3 | VFG0793 | Protein | 3e-92 | 42 |
