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Name : AFE_2408 (AFE_2408) Accession : YP_002426794.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : S : Function unknown COG ID : COG4951 EC number : - Position : 2154272 - 2156701 bp Length : 2430 bp Strand : + Note : identified by match to protein family HMM PF00270; match to protein family HMM PF01896; match to protein family HMM PF04851 DNA sequence : ATGAAATCCTCGACGCCACAAAATCCTCACCTTGACGCTCCAGCCAGTACGATAGGCGAACAGGATTCGTTCGCGGCGTT AGGGGAGGAAAACGCCCGCCTGGTCGCGTTGCTGGAATCGCATGGTATCGCGTGGCGTCTACCGCCTGAGCCAACGCCGC CCGTGCCGGAGTCAGCCCCCTCCCATTTTTCAGCCGAGGCAAAGGTGGCGCTGTTTCGTCGGCTATTTCGTGGGCGAACA GATGTCTATCCCGTCCGCTGGGAGAGCAAGAGTACGGGTAAGTCGGGATACGCGCCGGCCTGCGCCAATGAGTGGCGCCC CGGAGTGTGCGACAAGCCGCGCATCAAGTGCGGGGAATGTGGTAATCGGCGGCTGTCTCCGCTGTCCGATTCGGTCATCT ACGGTCATTTGCTCGGCAAGCATACGGTCGGCGTCTATTCCTTGCTGGAAGATGACACGTGCACCTTTCTCGCCGTCGAT TTCGATGAGGCCGAGTGGCAGGACGATGCCCGCGCTTTCGTGCATTCTTGCGAAGCACTCAGCGTCCCAGCGGCCCTGGA GATTTCGCGTTCCGGGCAGGGCGCACATGTCTGGGTATTTTTTGCCCACAAGGTGGCCGCACGAGACGCACGTCGCCTGG GTACGGCCATCATCAGCCATACCTGTGCGCGCACTCGGCAACTGAAGCTGAATTCCTATGACCGACTGTTTCCCAATCAG GACACGATGCCCAAGGGTGGTTTTGGTAACCTGATCGCCCTGCCGCTGCAGAAAAAGCCGCGCGAGACGGGCTGTAGCGT ATTCGTCGATACCGACCTGCGTCCGTACCCTGATCAATGGGCTTTCCTGGCATCCATCCAGCCGATGGCGCCGCAGGATA TCGAGCCCACCATCCTACGCGCCACGGATGGGACCCATCCGTTGGACGTCACCTTTATTGATGAAGAAGACCTGGCGACG CCGTGGACGCGTTCAACGCCAGCAATAACGAAGTTATCCGGGGCAATGCCAAAGACGCTCAGGTTAACATTGGGCAATCT CCTCTACTTCGAGAAAGCCCAATTGCCCCCGCCACTGGCCAACCGCTTGATTCGCCTTGCCGCGTTCCAGAATCCAGAGT TCTACAAGGCGCAGGCGATGCGGATGTCGGTGTGGGACAAACCGCGCGTCATCGGCTGTGCAGAAAACTATCCGCAGCAC ATCGCCCTGCCGCGCGGCTGCCTCGACGCCGCGCAGGAATTGCTACGCGACAACGGCATCCGCTGCGAACTGCGTGACAA GCGGGTTCCCGGTGAACCCATCGACGTACATTTCGTTGGCACATTGCGCCTTGATCAAGAGGCGGCTATCACCGCGATGC TGAGCCACGACGCGGGCGTATTGTGTGCGCCCACCGCCTTCGGCAAAACCGTCGTGGCGGCCGCAATGATCGCCCGGCAT GGCGTAAACACCCTGGTGCTGGTACATCGCACCGAATTGCTCAAGCAGTGGCAGGAGCGGCTGCAGTCGTTCCTCGGCGT GAGCAAGGGCGTGGTTGGCACAATTGGTGGTGGTAAAGCCAAGTCCACCGGCCAGATCGACATTGCCGTCATGCAGTCGC TGTCACGCCATGGTGAGGTAAATCCCATCGTCGAGAACTACGGTCACATCGTTGTGGATGAATGTCACCACGTCGGCGCG GCGTCTTTTGACGCCATCCTGAAGCGGGTCAAAGCGAAATATGTGCTCGGCCTGACCGCCACGCCGATTCGCCGTGATGG TCAGCAGCCCATCATCTTCATGCAGTGCGGACCGATTCGATATACGGCCGCGAAACCAGCCAGTGCCCCACATGATCTCG CGGTGATACCACGATTTTTTCATTCGCGCATCGACCTGCTGCCCGAAGCCGGGATTCAGGAGGTGTTCCGGCACCTTGCC AATGACCAGGCCCGGACGGGTGCCATTGCGACTGCGATCAAAAACGCTATCGTCCAAGGCCGCAAAGTGCTTGTGCTAAC TGAGCGCAGTGAACATCTCGACGCCATTCGTGCGGCTTTGGGCGGGAAAGTGTCGCCACTATTCGTTCTGCACGGTCGGA TGCCCAAAAAGGAGCGTGCTTTGGTCATCGCGGAGCTTGGCGCGCTGCCACCGCATGCCCCTCGTGTACTGCTCGCCACC GGCAAGTTGGTCGGGGAAGGATTCGACCATCCGCCACTGGATACGCTGGCCCTGGCAATGCCGGTGTCGTGGAAAGGCAC GTTGCAGCAGTACGCCGGCCGGCTGCACCGGGAGCATGCCACCAAGACCCATGTGCGCATTCTTGACTTCATTGATACCG GGCACCCGGCACTATTGCGGATGTGGGATAAACGTCAGCGCGGTTACCGGGCGATGGGTTATCGAATAATGGATGAGGGT GCCACTGATTTGTCCATGCCGACACCATGA Protein sequence : MKSSTPQNPHLDAPASTIGEQDSFAALGEENARLVALLESHGIAWRLPPEPTPPVPESAPSHFSAEAKVALFRRLFRGRT DVYPVRWESKSTGKSGYAPACANEWRPGVCDKPRIKCGECGNRRLSPLSDSVIYGHLLGKHTVGVYSLLEDDTCTFLAVD FDEAEWQDDARAFVHSCEALSVPAALEISRSGQGAHVWVFFAHKVAARDARRLGTAIISHTCARTRQLKLNSYDRLFPNQ DTMPKGGFGNLIALPLQKKPRETGCSVFVDTDLRPYPDQWAFLASIQPMAPQDIEPTILRATDGTHPLDVTFIDEEDLAT PWTRSTPAITKLSGAMPKTLRLTLGNLLYFEKAQLPPPLANRLIRLAAFQNPEFYKAQAMRMSVWDKPRVIGCAENYPQH IALPRGCLDAAQELLRDNGIRCELRDKRVPGEPIDVHFVGTLRLDQEAAITAMLSHDAGVLCAPTAFGKTVVAAAMIARH GVNTLVLVHRTELLKQWQERLQSFLGVSKGVVGTIGGGKAKSTGQIDIAVMQSLSRHGEVNPIVENYGHIVVDECHHVGA ASFDAILKRVKAKYVLGLTATPIRRDGQQPIIFMQCGPIRYTAAKPASAPHDLAVIPRFFHSRIDLLPEAGIQEVFRHLA NDQARTGAIATAIKNAIVQGRKVLVLTERSEHLDAIRAALGGKVSPLFVLHGRMPKKERALVIAELGALPPHAPRVLLAT GKLVGEGFDHPPLDTLALAMPVSWKGTLQQYAGRLHREHATKTHVRILDFIDTGHPALLRMWDKRQRGYRAMGYRIMDEG ATDLSMPTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1129 | NP_286664.1 | helicase | Not tested | TAI | Protein | 0.0 | 67 |
| Z1568 | NP_287072.1 | helicase | Not tested | TAI | Protein | 0.0 | 67 |
