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Name : kdpA-3 (AFE_2232) Accession : YP_002426630.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : K+-transporting ATPase, A subunit Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 1986000 - 1987751 bp Length : 1752 bp Strand : + Note : identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680 DNA sequence : ATGATATCCACCATCATACTGACAGCCGTGGTTTTATTCTTGACCATTCTGCTGGCCTTGCCTCTGGGACGCTATATGCA TCGAGTCTATGCGGGCGATCGATTCTGGGCGACACGCCTGATGGGTCCCGTGGAGCGGGGAATTTACCGCGTCACCGGAG TTTCGGCGAGCGAGGAAATGGGTTGGAAGCGCTACGCCATCGCCCTGTTGATCTTTAACCTGATCGGTGGCGTTTTTCTC TATGCCTTGTTGTTGGCGCAAGGTGCTCTACCCCTGAATCCTTTACACTTCGGTGGCGTCCAGGGTGGCTCCGCTTTCAA TACTGCGGTGAGCTTCCTCACCAATACCAATTGGCAGGATTACGCCGGCGGCTCGACCATGAGTTATCTCTCGCAGATGC TGGGCCTGACCGTGCAGAATTTCCTCTCGGCGGCGACGGGTATCACCATCGTCCTGCCCATCATTCGCGCTATCGCCCGT CATAAAACCAAGGATCTCGGAAATTTCTGGGTCGATATGACCCGCACCGTTTTATACGTGCTGCTTCCCCTCTCCGCGCT CTTTGCCTTGATTCTCATGGAACAGGGCGTGGTCCAAACCCTCACCGGTGAGGTGCGGGCGGATCTTATTGCACCCTTTG TATCCGGCGGTAAGACCATTCTTCATCAGATAATGCATGTGGGACCGGTAGCCTCTCAAGAGGCCATCATGATGCTCGGC AACAATGGCGGCGGCTTTTTCAACATGAACGATGCCCACCCTTTCGAAAACCCCACCGCTCTCACCAATTTTTTAGAAAC CCTGGCCATGATTCTCATTCCCTCCGCACTCGTGTTCCTGTTTGGGCATATGGCCAACGCCAAGCGCACAGCATGGGCCA TCCTGATTTCCATGCTGATGCTCTTCATCCCCCTGACGCTCGTCAGTCAGCACTATCAACTGGCCGGGAACCCGGTGTTC ACCCAGTTGGGGATCTCCCAGGCCAACACCGCGAGTCTTGCCGGCGGTGGCAATATGGAGGGAGTGGAAGACCGCATCGG CGCCGGCGCGACCGCGCTCTTTGCAACGGTGGCCACCGCGACCTCTACGGGGGCGGCCAACGGCGCCTACGATTCTCTCA TGCCGTTGTCGGGGGGGGTAAACCTTTTCCTGATGCAATTGGGTGAGGTCGTGTTTGGCGGTGTCGGTTCCGGTCTCGCC ACTTTCCTCGCCTTCATGATTTTCGCGGTTTTTCTCGGTGGTCTCATGGTGGGGCGCACGCCGGAGTTTCTCGGCAAGAA GATCGAGTCCTTTGAAATAAAAATGACCTCCCTCTCCATACTGGTCATGCCGTTGCTGGTGTTGATCGGTACTGCCCTCG CCGTCACCACGGTGGCGGGGCGGGCCGGTGTATTCAATCCCGGGGCGCACGGTTTCAGCGAAGTGCTCTATGCCGTGACG AGCCCCGCCAACAACAACGGCAGCGCATTCGGCGGCCTGAGCAGCAACACCCGGTTCTACAACCTGCTTACCGGCATGTG CATGCTGTTGGGCCGGTACTGGACCTATCTGCCGTTGCTGGCGCTGGCGGGTGCTCTGGTCGAGAAAAAGAAAATCCCCG CGGGATCGGGAACACTGACGACTTACACGCCTATTTTCATTGGCCTGACGATTGGCGTCATTCTTCTGGTCGGCGCGCTC AACTTCTTTCCGGCGCTGGCGCTGGGTCCAGTTGCGGAGCAACTCGCGCCCCTGGCCACACTGACTCATTGA Protein sequence : MISTIILTAVVLFLTILLALPLGRYMHRVYAGDRFWATRLMGPVERGIYRVTGVSASEEMGWKRYAIALLIFNLIGGVFL YALLLAQGALPLNPLHFGGVQGGSAFNTAVSFLTNTNWQDYAGGSTMSYLSQMLGLTVQNFLSAATGITIVLPIIRAIAR HKTKDLGNFWVDMTRTVLYVLLPLSALFALILMEQGVVQTLTGEVRADLIAPFVSGGKTILHQIMHVGPVASQEAIMMLG NNGGGFFNMNDAHPFENPTALTNFLETLAMILIPSALVFLFGHMANAKRTAWAILISMLMLFIPLTLVSQHYQLAGNPVF TQLGISQANTASLAGGGNMEGVEDRIGAGATALFATVATATSTGAANGAYDSLMPLSGGVNLFLMQLGEVVFGGVGSGLA TFLAFMIFAVFLGGLMVGRTPEFLGKKIESFEIKMTSLSILVMPLLVLIGTALAVTTVAGRAGVFNPGAHGFSEVLYAVT SPANNNGSAFGGLSSNTRFYNLLTGMCMLLGRYWTYLPLLALAGALVEKKKIPAGSGTLTTYTPIFIGLTIGVILLVGAL NFFPALALGPVAEQLAPLATLTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 3e-80 | 46 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 2e-80 | 46 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-65 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-65 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 9e-66 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-65 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-65 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 3e-65 | 42 |
