|
Name : murD (AFE_0208) Accession : YP_002424717.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 184551 - 185897 bp Length : 1347 bp Strand : - Note : identified by similarity to SP:P14900; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087 DNA sequence : ATGGACATGAACGGGAAAAAGGCATACATCCTCGGCATGGGCAAGACGGGACACTCCCTCTTGCGTACGGCCCTGCGCCT GGGCGCTCATTGCCGAGTGGCCGACACGCGTCTGCTACAAGACGCCGCCGACTTGCGGCGCCGTTATCCAGCAGTCGATT TTCATTTTGGTGACATGCCCGAGGACCTGTTTCTGGAGGCGGATATTCTTCTGCTCAGCCCGGGGCTGGCGCCGTCGCTG CCCGCTCTCGTCAGCGCCAGACGGGCCGGCATCGAAATTCTGGGCGATATCGAACTTTTTGGCCGGATCACCCGGGCGCC CATCGTCGCGATCACCGGCAGCAATGGTAAAAGCACCGTCACCACCCTGGTGGGCGAAATGGCACGGGCCGCGGGGCTGC GCGCCGCCGTCGGCGGCAACCTCGGCACTCCCGCCCTCGACCTTCTGCCCGAAACAGGGCCCGAGCCCGATCTCTATGTC CTCGAGCTTTCCAGCTTCCAGCTTGCGGCCTGTCATGATTTCCACCCTCGCGCCGCCGCCATTCTCAACCTGAGCCCGGA TCATCTGGACTGGCATGGTGACTATGCGGCCTATGCTGCCGCGAAAACCCGCATTTTCCGGGCGATGGGCGCAGGGGACA CGCTGGTACTGAACGCCGGAGACACCTTTACGGCCGCCCTACCGCCCCAGGTCCCTGCGGGCGTGCGGGTGCAGTTCTTT GGCGGCGCTGACGAACACGACGCCAGCATCGCCGGGGACCGGCTCTGCCTGCGTAGCGATGGTCCCCTGCTGGATTTGGA TCAACTCCCGCTGCGCGGCGCGCATAACGCCGAAAATGCGCTGGCCGCCGCCCTGCTGGCCCGCGCGATGGCCGTCCCTG TGACGGCCATCCGCCAGGCGTTGCGTACTTTCCCGGGTCTACCCCACCGCCTTGCCCGGATCGCCGAGATCAACGGAGTG AGTTACTACGACGATTCCAAGGGCACCAACCTGGGCGCGACCCTCAAAGCCATGTCCGGCTTGCCGGGACCCCTGGTGAT GATACTCGGTGGCGATGCCAAGGGGGCCGACCTGAGCCCCCTGCGGGAGGCCTGTCGCGGGCAGCGTGGCGTTGTCGTCC TCGGTAAGGACGGGCCACAAATCTCCGCCCTGCTCGCCGGAATACTGCCCGTCGAGAGTGCCCGGAACATGGCTCAGGCT GTCGAGAAGGCGGCGGTGCTGGCGCAGCGTGGCGATCAGGTGCTGCTCTCGCCCGCCTGCGCCAGTACCGATATGTTTAC CGATTATCAGGATCGCGGCCGTCAATTCGCCGTGGCGGTACGGGCCCTGACGGAGGATCTGGCATGA Protein sequence : MDMNGKKAYILGMGKTGHSLLRTALRLGAHCRVADTRLLQDAADLRRRYPAVDFHFGDMPEDLFLEADILLLSPGLAPSL PALVSARRAGIEILGDIELFGRITRAPIVAITGSNGKSTVTTLVGEMARAAGLRAAVGGNLGTPALDLLPETGPEPDLYV LELSSFQLAACHDFHPRAAAILNLSPDHLDWHGDYAAYAAAKTRIFRAMGAGDTLVLNAGDTFTAALPPQVPAGVRVQFF GGADEHDASIAGDRLCLRSDGPLLDLDQLPLRGAHNAENALAAALLARAMAVPVTAIRQALRTFPGLPHRLARIAEINGV SYYDDSKGTNLGATLKAMSGLPGPLVMILGGDAKGADLSPLREACRGQRGVVVLGKDGPQISALLAGILPVESARNMAQA VEKAAVLAQRGDQVLLSPACASTDMFTDYQDRGRQFAVAVRALTEDLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 3e-42 | 44 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 3e-42 | 44 |
