Gene Information

Name : metZ (AFE_2063)
Accession : YP_002426466.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine sulfhydrylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.2.99.-
Position : 1812624 - 1813838 bp
Length : 1215 bp
Strand : -
Note : identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01325

DNA sequence :
ATGAACACCAAAAATACCAACCCCGACTGGGCGGACCGGCTGCGTCCGGAAACCATCGCCATCCGTGCCGGTATTCACCG
TACCCAGGAGCAGGAGCACAGCGAGGCCATCTTCCCCACCTCCAGCTTCGTCTTCGACTCGGCAGAAGAAGCCGCAGACC
GCTTCGCCGGAAGGGTGCCGGGAAATATCTATGCCCGCTTCACCAATCCTACCGTACGCACCTTTGAAGAACGGCTTGCC
GCGCTGGAGGGGGCGGAAGCCTGTGTCGCCACGGCCTCGGGTATGGCCGCCTGTCTGACCGCCTTCATGGGGATACTCAA
GGCGGGTGACCATGTCGTCGCTTCCCGCTCCATTTTTGGTACGACGGTGCAATTGCTCGGCAATATTCTCAGCCGCTTCG
GAGTGGAGACCAGCTTTGTGCCGCTGGCCGATGTGCCGGCGTGGCGCGCGGCACTGCGTCCCAATACCCGTATGCTCTTC
CTGGAAACGCCTTCCAATCCGCTCACCGAGATTGGCGACATGCAGGCCCTGGCGGATCTGGCTCACGTCCATGATGCCTG
GCTGGTGGTGGACAACTGCTTCTGCACACCGGCCTTGCAGCAGCCCCTCAAGTTTGGCGCCGATCTGGTCATCCACTCCG
CCACCAAATATCTGGATGGGCAGGGGCGAACCCTGGGGGGCGCGGTGTGCGGCAGTACCGAACTGCTCAATAGCGGGCCC
CGCAATTTCGTGCGGACGGCGGGTCCGAGCCTCAGTCCTTTCAATGCCTGGGTGCAGCTCAAGGGCCTGGAGACTCTCGG
ACTGCGTATGGAGCGCCATTGCGCCAACGCCCAGAAGATCGCTGAATGGCTGGAGGCACGGCCGGAAGTGGCGCGGGTCT
ATTATCCGGGCCTCGACAGCCATCCGCAGCAGGCCCTTGCCGCGCGTCAGCAGCGCCTGCCGGGCGCCATCCTGTCCTTC
GATCTGCACGGTGGCCAGAAAGCGGCGTGGGCCTTTGTCGACGCCCTGCGCCTGCTTTCCCTGACCGCCAATCTCGGCGA
CGCCAAGACCACCATTACGCACCCGGCGAGCACCACCCATAGCCGGGTCAGTCCCGAGGCACGGGCTGCCGCGGGAGTCG
GTGACGGCTTGCTGCGGATCAGTGTCGGGCTGGAACACGCCGATGACCTGCGCGAGGATATGGAGCGTGGCTTTGCCGCT
CTTGTGGCCCGCTGA

Protein sequence :
MNTKNTNPDWADRLRPETIAIRAGIHRTQEQEHSEAIFPTSSFVFDSAEEAADRFAGRVPGNIYARFTNPTVRTFEERLA
ALEGAEACVATASGMAACLTAFMGILKAGDHVVASRSIFGTTVQLLGNILSRFGVETSFVPLADVPAWRAALRPNTRMLF
LETPSNPLTEIGDMQALADLAHVHDAWLVVDNCFCTPALQQPLKFGADLVIHSATKYLDGQGRTLGGAVCGSTELLNSGP
RNFVRTAGPSLSPFNAWVQLKGLETLGLRMERHCANAQKIAEWLEARPEVARVYYPGLDSHPQQALAARQQRLPGAILSF
DLHGGQKAAWAFVDALRLLSLTANLGDAKTTITHPASTTHSRVSPEARAAAGVGDGLLRISVGLEHADDLREDMERGFAA
LVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metZ YP_002426466.1 O-succinylhomoserine sulfhydrylase BAC0207 Protein 2e-62 44