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Name : clpB (AFE_1970) Accession : YP_002426377.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1725114 - 1727714 bp Length : 2601 bp Strand : - Note : identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGCGTACCGACAAACTGACTACCAAATTCCAACAGGCTTTTCAGGATGCTCAGAGTCTTGCGCTGGCGCAGGATCACCA GCAGATGGAGCCCATCCACTTGCTTGCTGCTTTTCTTGATCAGGAAGGAGGTATCGCTCGGCCACTCCTGTCAAAGGCCG GCGTGCGGGTCGATGCCCTACGCAACCAGTTGAACCGCGCGCTGGAGTCCATGCCGAAGGTACAAGGGCATCCGGGCGAG GTGCAGGTGGGCCGCGATCTTACCAATATGCTCAATCTGGCAGACAAGATAGGCCAGAAGCGCGGCGACACGTATATCTC CACCGAACACTTCCTGCTGGCCTTGATGGACGACAAGGGCGAGGCGGGGCGCCTCCTGAAAGAGGCGGGTGCCACCACCA AGGATCTGGAACAGGCCGTCCACGATCTGCACGGCGGGGAAAAAATCAATGATGCCAATGCCGAAGAGCAACGTCAGGCA CTGGAGAAATATACCATTGACTACACCGAACGGGCCAGTCAAGGCAAGCTGGACCCGGTGATCGGCCGTGACGACGAAAT CCGCCGGACCATTCAGGTATTGCTGCGGCGCAGCAAAAATAATCCGGTGTTGATCGGTGAACCAGGTGTGGGCAAAACCG CTATTGTCGAGGGCCTGGCACTGCGCTTGATTAATGGCGAAGTGCCCGAATCTTTGCGCGATAAGCGCCTTCTGGGTTTG GACTTGGGGGCACTGATTGCCGGTGCCAAGTTTCGCGGTGAGTTCGAGGAACGTCTGAAGTCGTTATTGAACGACCTGGA GAAGAGTGAGGGTAAAATCATTCTTTTTATTGATGAAATTCATACGCTGGTGGGGGCTGGCAAGGCCGAGGGCTCCATGG ACGCGGGCAATATGCTCAAGCCGGCGCTGGCGCGCGGCGAGTTACATTGCATCGGTGCCACCACACTGGATGAATATCGT AAATATATTGAAAAAGATGCGGCGCTGGAACGACGTTTCCAGCGGGTGCTGGTGGATGAACCCAGTGTGGAAGACGCCAT CGCCATTTTGCGTGGCCTGAAAGAACGCTATGAAGCTCATCATGGGGTACGCATTACCGATCCGGCGCTGGTCGCCGCAG TGCAGCTTTCACACCGCTATATCACCGACCGTAATCTGCCTGACAAAGCCATAGATCTGATGGATGAAGCGGCCTCCCGC ATCAAGATGGAAATCGATTCCAAACCTCAGGAACTGGATGAACTGGAGCGCCGTATCATTCAGTTGAACATCGAGCGCGT GGCGCTGGAGAAGGAGAAGGATGAGGCCAGCCGTAAGCGCCTGGATATTCTGCAGGCCCAAATCAAAGAGTCAGATCGAA AATATCAGGAGCTGGAAGAAGTTTGGAAAGGCGAAAAGCTGGCTATCGAAGGTACCTCACAGATTCAGAAAGAACTGGAT CGCAAGCGCGTGGAGCTGGACACGGCGCGTCGTGCCAACGACTTGGAGCGTATGGCGGAACTGCAATACAGCTCTATTCC GGCATTGGAAGCACAGCTCCATGCCGCTGAAATCCATGCGCAATCAGCAGGTTCAGGCGCTAAACCCACGTTGTTGCGCA CCGAGGTGGGTGAAGAGGAAATCGCCGAAGTGGTGGCCCGCTGGACCGGCATTCCTGTCTCCAAAATGCTGGAGGGTGAA AAAGAAAAACTCCTCAAGATGGAGGAGCGCCTGCAGGCGCGGGTAGTGGGTCAGAGCGAGGCGGTGGCCGCGGTATCCAA CGCCATTCGCCGCTCCCGGGCGGGGCTGTCTGACCCCAAGCGTCCCAATGGCTCTTTCCTTTTTCTTGGCCCCACGGGCG TCGGCAAAACGGAGTTGACCAAGGCCCTTGCCGAATTTCTCTTCGACAGTGAAGACCACCTGGTGCGCATCGACATGAGC GAATTCATGGAGAAGCATTCGGTGGCACGGCTCATTGGCGCGCCTCCGGGATACGTAGGTTATGAAGAAGGAGGCTATCT CACTGAAGCCGTGCGGCGCAAACCGTATTCGGTCGTATTGCTGGACGAGGTGGAGAAGGCCCACCCGGAAGTCTTCAATA TCCTCCTGCAGGTACTGGATGACGGTCGGCTCACCGATGGCCAGGGGCGCACGGTAGATTTCCGCAATACCGTCATCGTC ATGACTTCCAATCTCGGCTCCGACCGAATTCAGGAATTCAGTCGCAAAGGGGAGTATGACAGTATGCGCGTGGCGGTACT GGACGTGGTGCAGGATCACTTCCGTCCGGAGTTCCTCAACCGCATTGATGAGCTGGTCATCTTCCGTCCCCTCACCGCGG TGCAACTCCGTGAGATTACCGGGATTCAGATGGGCTTCCTGCGGTCACGCCTGCGCGAGCGGGATATGGATCTGGTACTC AGTGATGGCGCACTGGACCATCTGGCCGAGGTCGGTTATGACCCCGTCTACGGCGCTCGCCCCCTGAAAAGGGTGATTCA GCGGGAGATCGAAAATCCCCTTGCCCAAAAACTCCTGCGTGGTGACTTCGGACCCGGTGAGATTATTGAAGTGGTTCTTG AAGGAGACCGCTTTACCTTTGTCGGACAGCGGGTGCACTGA Protein sequence : MRTDKLTTKFQQAFQDAQSLALAQDHQQMEPIHLLAAFLDQEGGIARPLLSKAGVRVDALRNQLNRALESMPKVQGHPGE VQVGRDLTNMLNLADKIGQKRGDTYISTEHFLLALMDDKGEAGRLLKEAGATTKDLEQAVHDLHGGEKINDANAEEQRQA LEKYTIDYTERASQGKLDPVIGRDDEIRRTIQVLLRRSKNNPVLIGEPGVGKTAIVEGLALRLINGEVPESLRDKRLLGL DLGALIAGAKFRGEFEERLKSLLNDLEKSEGKIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQRVLVDEPSVEDAIAILRGLKERYEAHHGVRITDPALVAAVQLSHRYITDRNLPDKAIDLMDEAASR IKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRKRLDILQAQIKESDRKYQELEEVWKGEKLAIEGTSQIQKELD RKRVELDTARRANDLERMAELQYSSIPALEAQLHAAEIHAQSAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLEGE KEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTELTKALAEFLFDSEDHLVRIDMS EFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIV MTSNLGSDRIQEFSRKGEYDSMRVAVLDVVQDHFRPEFLNRIDELVIFRPLTAVQLREITGIQMGFLRSRLRERDMDLVL SDGALDHLAEVGYDPVYGARPLKRVIQREIENPLAQKLLRGDFGPGEIIEVVLEGDRFTFVGQRVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-90 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-97 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 5e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002426377.1 | clpB protein | VFG2076 | Protein | 3e-99 | 45 |
