|
Name : AFE_1966 (AFE_1966) Accession : YP_002426373.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1718746 - 1719747 bp Length : 1002 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 DNA sequence : ATGGAAGGCAGAATACTTATTACCGGTGCTGCGGGTTTTATCGGGTTTCATCTGGCGCGTCGTCTGTTGGCCGATGGCTG GGTTGTCAGCGGGATAGACAACCTCAATGACTACTACGATCCCGGCCTGAAACGCGGCCGTCTGGCGCAACTGGAGGGGC ACCCAGCCTTCCAGTTCCAACCTCTGGATCTGGCAGATCGCGAGGGTATGCAGACGCTTTTTGCAGGCCCCCACTTTGAT GCCGTCGTCAACCTCGCGGCTCAGGCAGGGGTGCGGCACTCCCTGAAAGCACCGCACAGCTACGTGGACAGTAATGTCGT TGGTTTTCTGAATGTGCTGGAGGGCTGCCGGGCGCAGGGGGTCGATCATCTGCTTTTCGCTTCTTCCAGTTCGGTATATG GTGCCAACAATCGTTTGCCTTACAGTGTCCATGACCCGGTAGATCATCCAGTCAGCCTTTATGCGGCCACCAAGCGGGCA GGTGAGCTCATGGCGCACAGCTACGCTCATCTTTATGGTATTCCCAGTACTGGATTGCGGTTTTTTACAGTCTATGGCCC TTGGGGGCGTCCCGATATGGCCTATTTCAGCTTTACGCAGAAAATCCTGGCCGGGCATCCCATCCCCGTATTCAACCACG GCCAGATGCAGCGCGATTACACTTATATCGATGACATCATCGAAGGGGTGGCGCGACTCATTCCACGTGCGCCAGAAGCG CAGGATATCTGGCCGGAAGACCCTGCAAGCAGTGCCGCCCCCTTCTGCATTCAGAATATCGGTAACCACACACCCGTTGC ACTCACGGATTTTATCCGCATTCTGGAGGAGTGCCTCGGCAAGTCCGCGCAAATTGAATGGCTTCCCATGCAGGATGGCG ACGTGGTGGCTACCTATGCCGACGTTACCGCGTTACAGCAGAGCGTGGGCTTTGCCCCAAACACCCCTTTACGGACGGGT CTCCAGCGCTTTGTGACCTGGTATCGCCAGTACTACGGCTGA Protein sequence : MEGRILITGAAGFIGFHLARRLLADGWVVSGIDNLNDYYDPGLKRGRLAQLEGHPAFQFQPLDLADREGMQTLFAGPHFD AVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLEGCRAQGVDHLLFASSSSVYGANNRLPYSVHDPVDHPVSLYAATKRA GELMAHSYAHLYGIPSTGLRFFTVYGPWGRPDMAYFSFTQKILAGHPIPVFNHGQMQRDYTYIDDIIEGVARLIPRAPEA QDIWPEDPASSAAPFCIQNIGNHTPVALTDFIRILEECLGKSAQIEWLPMQDGDVVATYADVTALQQSVGFAPNTPLRTG LQRFVTWYRQYYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-87 | 50 |
