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Name : tkt-1 (AFE_1843) Accession : YP_002426258.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1601311 - 1603341 bp Length : 2031 bp Strand : + Note : identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 DNA sequence : ATGACAACTCCAACAGCCCCCTTTGGGGGGGAATACACATCCATTGATCAGCTTTCTATCAATACGATTCGCACGCTGGC TATGGACGCTGTGCAACAGGCCGATTCAGGGCATCCAGGGACGCCCATGGCGTTGGCTCCAGCCGGCTACGTGCTATGGA CGCGATTCCTTCGACACCATCCGTGCAATCCCATGTGGTTCAACCGGGACCGCTTCGTCTTATCGGCTGGGCATGCCTCC ATGCTGCTGTATGCCTTACTCCATCTCAGCGGATATGACCTTTCACTCGAAGAAATCCGGCATTTTCGTCAATGGGGCAG CAAGACTCCCGGACATCCGGAATACGGCCTCACTCCAGGGGTAGAAACCACCACTGGCCCTCTTGGTCAGGGCCTGATGA ACGCGGTGGGCATGGCCATGGCCGAGGCCCATTTGGCAGCCCGCTTCAACCGGCCGGGATATGAAATCATCAATCACCAG ACCTACGTTTTTTGTAGTGACGGCGATCTCATGGAGGGGGCATCCCACGAAGCCGCTTCCCTGGCTGGGCATTTAGCTTT GGGCAAACTGATCGTGCTCTATGACGACAACCACATTACCATCGAAGGGAGTACGGCACTGGCCTTTTCCGACGACGTCG CCCGGCGTTTCGACGCTTACCATTGGCATGTCCAAAACCTGGGCGAGGCGGCGAATGAGCTCGACACATTGGAGAACGCC TTCCGTAATGCGCAGCAGGAAAGCAATCAGCCCTCCTTGATCATCGTCCGGTCTCATATCGCCTATGGCGCCCCTCATGC CCAGGATACCGCCAAGGCCCATGGAGCCCCGTTGGGGGAAGCGGAGATTCGTGCCACGAAAGCGTTCTATGGATGGCCAC CGGACGCCGGATTCCTCGTCCCGGATCCGGTGTTAATGCATATGCGTCAGGCTCAGGAGCGCGGGGCGGATCTGGAATCG GCATGGAATCGGAAATTCGAAGCCTATCAGAAGGATTACCCCCAGGAGGGCGCCCATCTGATAGCGGCCATGGCGGGGGA GCTTCCTGAAGGTTGGGACGAGAACATTCCCCACTTTACTCCTGAGGATGGCCCCATGGCGACTCGGGTGGCCTCCGAGA AGACTTTGAACGCTTTTGCCGATAAGGTTCCCTGGTTGATGGGCGGTAGCGGAGATCTGGCGCCGTCCACCAATACCCGG ATCGCCAGTTCCGGGGATTTTGAAAAAGACGGTTACAAAAATCGCAACATTCACTGGGGGGTGCGCGAGCACGTCATGTG TGCCGCCTGTTCCGGTATGGCGCTCCATGGCGGGATTCGCCCTTATGGCGCAAGTTTTCTGATCTTCACCGACTATGCGC GGCCGGCCATCCGTCTCGCCGCCATGATGAGGCTGCCCGTGATTTACGTGATGACCCACGATTCCATCGGTCTCGGGGAA GATGGACCGACGCATCAACCGATAGAACATCTGGCGTCGTTCCGCGCCATGCCCAATCTGTGCGTAATCCGTCCAGCCGA TGCCAACGAGGCGGCCTATGCGTGGCGTGCGGCCATCATCCGCCGGGACGGGCCTACGATGCTCGTCCTTACGCGGCAAT CCCTTCCCGTATGGGACCGCAGCCTTCTCGGTGAGGCCAGAGGGAGCATGCAGGGGGCCTATGTGCTGTCCCGAGAACGG GGCGGTCGCCCTCATATTCTTCTCCTAGCCAGCGGTTCCGAGGTGCAGCTCGTTCTGCAAGCCCAGGCCAAACTATACGA GCGAGGAATAGATGCCCGGGTGGTCAGCATGCCCAGCTGGGAGCTGTTCCGCGCCCAGCCAGCGGCTTACCGGGATACGG TGCTCCCACGAGATATCAAAGTCCGGCTCGCCGTAGAGGCTGCGGCATCCCTGGGGTGGTGCGAATGGGTGGGAGAGGGC GCCACCATAGGCCTGAGCCGCTTCGGCGCCAGTGCACCCTATCCAGAAAATTTCCGCCATCTGGGATTCACCGTGGATAA TGTGGTACAGGAAGCCCAACGGCTATTATAA Protein sequence : MTTPTAPFGGEYTSIDQLSINTIRTLAMDAVQQADSGHPGTPMALAPAGYVLWTRFLRHHPCNPMWFNRDRFVLSAGHAS MLLYALLHLSGYDLSLEEIRHFRQWGSKTPGHPEYGLTPGVETTTGPLGQGLMNAVGMAMAEAHLAARFNRPGYEIINHQ TYVFCSDGDLMEGASHEAASLAGHLALGKLIVLYDDNHITIEGSTALAFSDDVARRFDAYHWHVQNLGEAANELDTLENA FRNAQQESNQPSLIIVRSHIAYGAPHAQDTAKAHGAPLGEAEIRATKAFYGWPPDAGFLVPDPVLMHMRQAQERGADLES AWNRKFEAYQKDYPQEGAHLIAAMAGELPEGWDENIPHFTPEDGPMATRVASEKTLNAFADKVPWLMGGSGDLAPSTNTR IASSGDFEKDGYKNRNIHWGVREHVMCAACSGMALHGGIRPYGASFLIFTDYARPAIRLAAMMRLPVIYVMTHDSIGLGE DGPTHQPIEHLASFRAMPNLCVIRPADANEAAYAWRAAIIRRDGPTMLVLTRQSLPVWDRSLLGEARGSMQGAYVLSRER GGRPHILLLASGSEVQLVLQAQAKLYERGIDARVVSMPSWELFRAQPAAYRDTVLPRDIKVRLAVEAAASLGWCEWVGEG ATIGLSRFGASAPYPENFRHLGFTVDNVVQEAQRLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-138 | 50 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-138 | 49 |
