Gene Information

Name : AFE_1776 (AFE_1776)
Accession : YP_002426194.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1539684 - 1540646 bp
Length : 963 bp
Strand : -
Note : identified by similarity to SP:O22007; match to protein family HMM PF00535

DNA sequence :
GTGACTGCCTCCATCATCGTCCCATGCCACAACGAATCCGGGAGTCTCCAGACTCTCTACACCCGTGTCCGTGCCGTCAT
GGACGAAGCGGGCGAGCCGTGGGAGATGATTTGCATCAATGACGGCAGCGGAGATGATACACTATTGCAGTTGATTGCCC
TGCATCACCAGGATCGTCGGGTCAGAGTTATTGATTTATCCAGGAATTTTGGCAAGGAAGCGGCGCTCACCGCCGGGCTC
GATGCCGCACTGGGAGAAGCCGCCATTCCGCTGGATGCTGACCTGCAAGACCCGCCCGAACTGATTCCCGAGCTTCTTGC
CCGATGGCGGGAGGGGTTTGATGTGGTGAACGCCGTTCGCCTCTCCCGCGAAGGAGAATCATGGCTCAAACGCGCCTCTG
CCCATGTCTTTTATCGGATCATCAATCGCATGAGCGACGTGGGGATCCCGCCGGACACGGGTGATTTCCGGCTGTTGTCC
CGTCCGGTTCTGGAGGCCCTGCAGGCGCTTCCCGAACGCAGACGATTCATGAAGGGTTTATTTGCCTGGGTCGGTTTTCG
CAGCACGAATGTGTACTACCATCGTGCGCCTCGCCATGCGGGAAAAACCACCTGGAGCTATTGGCGGCTATGGAATCTCG
CCGTAGAAGGTATTACTTCCTTTAGTCAGGTACCATTACAACTTGCCGCTTATCTGGGTTTTGCGGTTTCGCTGTTGGCC
TTTCTTTATGCCGTCTGGCTGGTAATCAGCACCCTGGCGTACGGAAACCCGGTAAAGGGTTATCCATCCATCATGGTTAC
CCTGTTGTTCCTGGGTGGCGTGCAGCTCATGGCCCTGGGGGTGATCGGTGAGTACCTCGGTCGGATCTATGAGGAAAGTA
AGCACAGACCGATTTACCTGGTCAGACAAGTGTGGGGCGGGGAGCATCCCACCCAGGCTGTTCAGCCGCAGGACCATCCC
TGA

Protein sequence :
MTASIIVPCHNESGSLQTLYTRVRAVMDEAGEPWEMICINDGSGDDTLLQLIALHHQDRRVRVIDLSRNFGKEAALTAGL
DAALGEAAIPLDADLQDPPELIPELLARWREGFDVVNAVRLSREGESWLKRASAHVFYRIINRMSDVGIPPDTGDFRLLS
RPVLEALQALPERRRFMKGLFAWVGFRSTNVYYHRAPRHAGKTTWSYWRLWNLAVEGITSFSQVPLQLAAYLGFAVSLLA
FLYAVWLVISTLAYGNPVKGYPSIMVTLLFLGGVQLMALGVIGEYLGRIYEESKHRPIYLVRQVWGGEHPTQAVQPQDHP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-63 50
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 5e-60 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AFE_1776 YP_002426194.1 glycosyl transferase family protein VFG0670 Protein 7e-61 49