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Name : AFE_1751 (AFE_1751) Accession : YP_002426170.1 Strain : Acidithiobacillus ferrooxidans ATCC 23270 Genome accession: NC_011761 Putative virulence/resistance : Unknown Product : umuC protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 1513748 - 1515031 bp Length : 1284 bp Strand : + Note : identified by match to protein family HMM PF00817 DNA sequence : ATGGCCATTGCCCTGGTAGACGCCAATAATTTTTATGTTTCCTGCGAACGGGTATTTCGCCCGGATCTGGAAGGGCGGCC CGTGGTGGTGCTCTCCAATAATGATGGCTGTGTCGTAGCGCGCTCGGCGGAAGTGAAGGCCTTGGGCGTCGCCATGGGCA CACCGTGGTTTCAGTTGCAAAAACTGGCCAGGCGGGAAGGAATCATCGCCTTGTCGAGCAATTACAGCCTCTATGCCGAT ATGAGCAATCGCATGATGGGGATTCTTTCGACCTTCAGTCCCATTCAGGAAGTCTACAGTATCGACGAATGCTTTCTGGA TCTGAGCGGCTTTGCGCAGGATCGGCTATCCCAATTGGGGCAAGCGGCCCGGCAGAGAGTCCGGCAATGGGTGGGATTGC CGGTCGGGGTAGGCATTGCAGCGACCAAGACGCTCGCCAAACTCGCCAACCATGTCGCCAAGAAGAGGCCGGAATATGCG GGAGTCTGCGTGTGGGACGATCTGCCTGAAGGGGATCAGCGGCATCTCTTGCAACAATTGCCCGTTTCCGAAGTCTGGGG GGTGGGTCGCCAGTGGACCACACGATTGCAGGAGACGGGCATTCAGACGGTCTGGGATCTCCGGCAAGCGGACCCCGCGC TGATGCGCAAGCGCTTCAGCATCCTCATGGAACGGAGCATACGGGAACTGCGCGGGGAACCTTGCATCGCCATGGTGGAA ATCCCGCCGCCCCGGCAGGAGATTCAATCCTCGCGTTCCTTCGGCCGCCCGGTGACCAGCGCGGAGGAATTGGGCGAAGC GATCAGCCTGTATACCGTAAGGGCCGTCTATAAACTGCGTCGTCAGGGTTCAGTGGCCGGTGCCCTGCGAGTGTTTATCC ACACCAGCCCCTTTCAGGCCCGTCTACCGTCATACCATGCCACGAGAACCGTCGCCCTGAATCGTCCCAGTCAGGATACC CGGGTGTTCCTGCAGGCCGGCCGTATCGCACTGGCGGATATGTATCGGTCGGGATTTGCCTATGCCAAGGCGGGGGTGCA TCTCCTGGAGATCACTTCGGCGGATGCCTTGCAGGCCGACCTTTTCCTGTCGGCCGAAGAGGAGGCGCGTGCCCATCGAC TAATGACCACGCTGGACCGGGTGAATGCGCGTTTTGGCACCGGCACCCTGCAGCCGGGCGTGGCCGGGCTGCAGGAACCG CGTGGATGGGCCATGAAACGCGGCAACAAGTCTCCTGCCTACACGACACGATGGGCGGAACTGGCCAGAGCAACACTGGA GTAA Protein sequence : MAIALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKLARREGIIALSSNYSLYAD MSNRMMGILSTFSPIQEVYSIDECFLDLSGFAQDRLSQLGQAARQRVRQWVGLPVGVGIAATKTLAKLANHVAKKRPEYA GVCVWDDLPEGDQRHLLQQLPVSEVWGVGRQWTTRLQETGIQTVWDLRQADPALMRKRFSILMERSIRELRGEPCIAMVE IPPPRQEIQSSRSFGRPVTSAEELGEAISLYTVRAVYKLRRQGSVAGALRVFIHTSPFQARLPSYHATRTVALNRPSQDT RVFLQAGRIALADMYRSGFAYAKAGVHLLEITSADALQADLFLSAEEEARAHRLMTTLDRVNARFGTGTLQPGVAGLQEP RGWAMKRGNKSPAYTTRWAELARATLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-77 | 45 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-77 | 45 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 6e-81 | 45 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 5e-66 | 43 |
