Gene Information

Name : glcE (AFE_1664)
Accession : YP_002426086.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 1436521 - 1437633 bp
Length : 1113 bp
Strand : -
Note : identified by similarity to SP:P52073; match to protein family HMM PF01565

DNA sequence : 
ATGTGCATCATGGCCAGTTGCCTTTCCCCGAACTGGAGCGTTTTTGACATAGATCAGAGCCAGACTTTGCAAGTGGCCGT
ACAAGAGGCCCACGCCAGATCCCAACCGCTCGCTATTCGTGGTGGCGGGAGCAAGACGTTTTATGGCCGCCAAACGCCGG
CATGCGATCTGCTCGATCTCGGTGGCCACCGGGGCATCATCGACTACGCGCCCAACGAGCTTTTCATCACTCTGCGCGCG
GGTACTTCCTTGCAAGCACTGGAGGCACAACTGGCGGAAGCCGGGCAGATGCTCCCGTTCGAGCCCCCGCATTTCGGACC
CGCCGCGACCATTGGCGGGACGCTGGCCTGTGGGTTTTCCGGTCCGCGCCGTCCCTACGCAGGGTCGGCTCGCGATATGG
TGCTGGGCATGCGCATCCTCAACGGACAAGGCGAAATCCTGCGCTTCGGCGGGCAGGTCATGAAAAATGTCGCCGGTTAT
GATGTTTCCCGTTTGATGGTAGGTGCCCTCGGCACCCTGGGCGTTCTGCTCGAGGTGAGCCTCAAGGTGCTGCCGCGTCC
CGATAGTACCGTGACTCTGGTGTGGCCGATGGACCCCGTTACCGCCGTCCAACGCATGAATGACTGGGCTGGACAGCCAC
TGCCGCTCTCCGCTACGGCGTATGATGGTGAGCACCTGTATATACGTCTTTCCGGCACCGGAAGCGCCGTGCGGGCGGCA
CAGACCCGGCTGGGCGGCGAAAGGTTGCCCGATGCCGAGGCGGCGGCCTTCTGGGTGGCACTGCGCGAACAGCGGAACGA
TTTTTTTCAGGGGGACGCACCCTTATGGCGTCTGGCCGTGGCCCCGGCCACCCCCCCCTTGCCGCTCGGGGATCAGACCC
TTATCGAATGGGGCGGCGGTCAACGCTGGCTGCGTGGTGCCCTTGATGCGACTGCCTTGCGGCAGTTGGCAGCGGAGCAC
GGTGGTCACGCCACCCTGTTTCGTGGTGGAAATCGCCGTGGCGAGGTCTTTCATCCCCTCGCACCACCGCTGCTGGCGAT
GCAACAACGGCTCAAAGCGGCCTTCGATCCGCGCGGCATCCTCAATTCGGGCCGTCTTTACGCCACCCTCTGA

Protein sequence : 
MCIMASCLSPNWSVFDIDQSQTLQVAVQEAHARSQPLAIRGGGSKTFYGRQTPACDLLDLGGHRGIIDYAPNELFITLRA
GTSLQALEAQLAEAGQMLPFEPPHFGPAATIGGTLACGFSGPRRPYAGSARDMVLGMRILNGQGEILRFGGQVMKNVAGY
DVSRLMVGALGTLGVLLEVSLKVLPRPDSTVTLVWPMDPVTAVQRMNDWAGQPLPLSATAYDGEHLYIRLSGTGSAVRAA
QTRLGGERLPDAEAAAFWVALREQRNDFFQGDAPLWRLAVAPATPPLPLGDQTLIEWGGGQRWLRGALDATALRQLAAEH
GGHATLFRGGNRRGEVFHPLAPPLLAMQQRLKAAFDPRGILNSGRLYATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 3e-69 49