Gene Information

Name : AFE_1373 (AFE_1373)
Accession : YP_002425808.1
Strain : Acidithiobacillus ferrooxidans ATCC 23270
Genome accession: NC_011761
Putative virulence/resistance : Unknown
Product : transposition helper protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1191240 - 1191998 bp
Length : 759 bp
Strand : -
Note : identified by similarity to SP:P55923; match to protein family HMM PF01695; match to protein family HMM PF08483

DNA sequence : 
ATGTTACAACAACCCACTCTGAACGCGCTGCGTCAGCTCAATCTCTACGCCATGGCTGAGGCTCTGGACGAACAATCTCG
TCTCCCCCAGATCCAGGATCTCTCCTTCGAGGAGCGTCTGGGTCTGCTCCTGGACCGAGAACTCTGTGCCCGGGACCAAC
GCCGTCTGACGCGCCTGCTGAAGCTCGCCCATCTCAAGCAGAATGCCTGTGTGGAGGATATCGACTATCGCGGCTCCCGT
GGACTGGACCGATCCAAGGTGATGGCACTGATCCAGAACACCTGGATTCGGCAAGGCCATAATCTGCTGATTACTGGCGC
CACCGGCACCGGCAAAACCTGGCTGGGCTGTGCCCTGGGCCACCAGGCCTGCCGTCAGGGATTAAGCGTTCGTTATTTGC
GCTTACCGCGCCTATTTGAGGAGCTCCGGATTCGTCACGGTGACGGCAGCTTCGGTCGCTATCTGAATACGCTCGCCAAG
GTGGATTTGATTATCTTAGACGACTGGGGGCTTGCCCCCATGAACGGGGAAGACGTGCGAGATTTGTTGGAGATCATTGA
GGATCGGGTGAACCAACGAGCCACGCTAATTACTAGCCAACTCCCTGTGGACCATTGGCACGAATACTTGGGTGAACCGA
CCGTGGCCGATGCGGTGCTGGACCGGTTGCTGCAAAGTGCCCACCGACTCGATTTGAAAGGGGACTCCCTGCGCCGTCAT
CGTGATGCTCACGAAACACCAAAACTTGACCCATCGTGA

Protein sequence : 
MLQQPTLNALRQLNLYAMAEALDEQSRLPQIQDLSFEERLGLLLDRELCARDQRRLTRLLKLAHLKQNACVEDIDYRGSR
GLDRSKVMALIQNTWIRQGHNLLITGATGTGKTWLGCALGHQACRQGLSVRYLRLPRLFEELRIRHGDGSFGRYLNTLAK
VDLIILDDWGLAPMNGEDVRDLLEIIEDRVNQRATLITSQLPVDHWHEYLGEPTVADAVLDRLLQSAHRLDLKGDSLRRH
RDAHETPKLDPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 2e-37 45
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 1e-37 45
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 1e-37 45
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 1e-40 43