Gene Information

Name : Mchl_5538 (Mchl_5538)
Accession : YP_002424203.1
Strain :
Genome accession: NC_011758
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 164269 - 164559 bp
Length : 291 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: mlo:msr5972 transposase

DNA sequence : 
ATGCAGCGTCGCAAGTTCGGACGTGAGTTCAAGATCGAGGCGGTTCGACTGATTCGCGAACGTGGTGTCAGTGTCGCGCA
GGCCGCGCGCGATCTCGATGTTCACGAGACGATGCTGCACCGGTGGGTGAGGCAGGCGGCGGCCGATCCGCGGCACGCCT
TTCCCGGTCAGGGCCAGATGAAGCCCGAGCAGATCGAGATCGACCGGCTGCGCAAGGAGGTCGCTCGTCTAAAAGCGGAG
CGTGACATCCTAAAAAAGGCCGCCGCATACTTTGCGAGGGACGCGATATGA

Protein sequence : 
MQRRKFGREFKIEAVRLIRERGVSVAQAARDLDVHETMLHRWVRQAAADPRHAFPGQGQMKPEQIEIDRLRKEVARLKAE
RDILKKAAAYFARDAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG13 AAN62235.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-09 42
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-13 41
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-13 41
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-13 41
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-13 41
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-13 41
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-13 41
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-13 41
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mchl_5538 YP_002424203.1 transposase IS3/IS911 family protein VFG1123 Protein 4e-14 41