Gene Information

Name : Mchl_5526 (Mchl_5526)
Accession : YP_002424192.1
Strain :
Genome accession: NC_011758
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 157559 - 158341 bp
Length : 783 bp
Strand : -
Note : PFAM: integrase; KEGG: bcj:BCAM1952 transposase

DNA sequence : 
GTGAGCGAGCGGCGCGGCTGCGCCGCGCTCGGCGTCGGTCGGTCGGGCGTCCGCTACCGCTCGACCAAGCCCGATCAGGC
ACCGCTGCGGATGCGCATCTGTGATCTGGCCAAGAGCCGGGTGCGCTACGGGTACTTCCGGATCTACATCCTGCTGCGCC
GGGAAGGTTGGCGGGTGAATCACAAGAGGGTCCACCGCCTCTACAGGGATGAGGGCCTCAGCCTGCGGCTCAAGCGGCCG
CGCCGGCACGTCAGCGCGGCACACCGTGAGCGTCAGCCTGCTGCGCTCCGGCCGAACGAACGCTGGTCGATGGACTTCGT
CTCCGACGCGCTGTTCGACGGCCGCCGGCTGCGGGCCCTGACGGTCGTCGATGCATTCACGCGCGAGGCTCTGGCGATCG
AGGTCGACCAGGGCATCAAAGGCGAACAGGTCGTGGCTGTCGTCGGCCGCTTGGCGCTGCTGCGCGGAGCACCATGCGCG
ATTCAGGTCGATAACGGGCCTGAGTTCGTCTCGAAAGCCCTCGACCGCTGGGCCTACGAGAACGGTGTCACGTTGGACTT
CTCACGGCCCGGCAAGCCGACCGACAACGCGCTGGTCGAGTCGTTCAACGGCCGGCTGCGCGACGAGTGCCTGAACGCGA
ACTGGTTCTTGTCGTTGGCCGACGCGAGGAGCAAGATCGAGACGTGGCGGCGGCACTACAACGAGAGCCGTCCTCACACC
GCCCTGGGGTGGCGAACACCCCAGGAATTCGCCCTAGCGGCGGCCCTGCAGGCCGCCGAATGA

Protein sequence : 
MSERRGCAALGVGRSGVRYRSTKPDQAPLRMRICDLAKSRVRYGYFRIYILLRREGWRVNHKRVHRLYRDEGLSLRLKRP
RRHVSAAHRERQPAALRPNERWSMDFVSDALFDGRRLRALTVVDAFTREALAIEVDQGIKGEQVVAVVGRLALLRGAPCA
IQVDNGPEFVSKALDRWAYENGVTLDFSRPGKPTDNALVESFNGRLRDECLNANWFLSLADARSKIETWRRHYNESRPHT
ALGWRTPQEFALAAALQAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 3e-60 61
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 7e-44 56
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-56 53
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 3e-27 49
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 2e-38 42