Gene Information

Name : Mchl_3813 (Mchl_3813)
Accession : YP_002422559.1
Strain : Methylobacterium chloromethanicum CM4
Genome accession: NC_011757
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4025580 - 4026188 bp
Length : 609 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_3506 response regulator receiver

DNA sequence : 
ATGGCCCCTGCCCTCGTGCATGTCATCGACGACGACCCCGCCATGCGCGACTCGGTCGCGTTCCTTCTCGACACGGCCGG
CTTCGACGTGCGGCTCTACGAGGCGGGAACGGCCCTGCTGGCGCGGCTCACGCGGCCGCTCCGAGGGTGCATCCTGACCG
ATATCCGTATGCCCGACCTCGACGGGTTGGCCCTGTTCCGCTCCCTCCGCTCCGCCGGTCACACGCTTCCCATCGTGATG
ATGACGGGGCATGGCGACGTGCCGCTCGCGGTCGAGGCGATGAAGCTCGGGGCCTGTGACTTCATCGAGAAGCCGTTCGA
TGGCGAGGCGCTCCTCCGGGCGCTGCAGGCCGCCCTGGAGCAGGGTGGGCCTAACGGCTCGGTCGATCCGATCCTGCAGG
ACTTCATGCGGCGGTTGGCGACCCTGAGCGAGCGCGAGCGCCAGGTTCTCGATCATCTGGTGACCGGGGGTACCAGCAAG
GAGATCGGGCGAAGGCTCCGGATCAGCCCGCGGACCGTCGAGATCTACCGGGCCAAGGTCATGGCCAAGACGCGGGCGGG
AAGTTTGCAGGAACTGGTCCGCTGGGCCGTGCTCGCCGGCTTCGTGTGA

Protein sequence : 
MAPALVHVIDDDPAMRDSVAFLLDTAGFDVRLYEAGTALLARLTRPLRGCILTDIRMPDLDGLALFRSLRSAGHTLPIVM
MTGHGDVPLAVEAMKLGACDFIEKPFDGEALLRALQAALEQGGPNGSVDPILQDFMRRLATLSERERQVLDHLVTGGTSK
EIGRRLRISPRTVEIYRAKVMAKTRAGSLQELVRWAVLAGFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 7e-22 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 7e-22 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 7e-22 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 5e-22 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 7e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mchl_3813 YP_002422559.1 LuxR family transcriptional regulator VFG0488 Protein 2e-22 41