Gene Information

Name : Mchl_0376 (Mchl_0376)
Accession : YP_002419241.1
Strain : Methylobacterium chloromethanicum CM4
Genome accession: NC_011757
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 364702 - 365400 bp
Length : 699 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver

DNA sequence : 
ATGCGCCTGCTCATCATCGAGGACGACCGCGAGGCCGCCGCCTATCTGGTCAAAGCGTTCCGGGAAGCCGGACACGCGGT
GGACCATGCGGGCGGCGGCCTCGACGGCTATGCGCTCGCCCGTGAGGGCGATTACGACGTGCTGATCGTCGATCGCATGT
TGCCGAAGCTCGACGGGCTCTCGCTCGTGCGCTCCCTGCGCGAGCAGGCGATCGCCACGCCGGTCCTCATCCTCTCGGCG
CTGGGCCAAGTGGATGACCGGGTGAAGGGGCTGAGGGCCGGGGGCGACGACTATCTCCCGAAACCCTACGCCTTCTCCGA
GCTTCTGGCCCGCACCGAGGTGCTGGCCCGCCGCCGCACGGCCGCGACCGGCCAGAGCGAGGCCACCGCCTACCGGGTCG
GCGACCTCGAACTCGACCGGCTCTCGCACCGGGTGACGCGAGCGGGCCGCGAGATCGTGCTTCAACCCCGCGAGTTCCGG
CTGCTCGAATACCTCATGCGCCATGCCGGGCAGGTCGTGACCCGGACGATGCTGCTGGAGCATGTCTGGGACTACCATTT
CGATCCGCAGACCAACGTCATCGACGTCCACGTCTCGCGCCTGCGCGCGAAGATCGACCGCGGCTTCGAGCATCCGATGA
TCCACACGGTGCGCGGCGCGGGCTACGTCATCCGGGCGGACGAGCCGCAAGCCCCGTGA

Protein sequence : 
MRLLIIEDDREAAAYLVKAFREAGHAVDHAGGGLDGYALAREGDYDVLIVDRMLPKLDGLSLVRSLREQAIATPVLILSA
LGQVDDRVKGLRAGGDDYLPKPYAFSELLARTEVLARRRTAATGQSEATAYRVGDLELDRLSHRVTRAGREIVLQPREFR
LLEYLMRHAGQVVTRTMLLEHVWDYHFDPQTNVIDVHVSRLRAKIDRGFEHPMIHTVRGAGYVIRADEPQAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-39 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0111 Protein 4e-57 50
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0083 Protein 8e-49 48
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0347 Protein 3e-50 47
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0125 Protein 2e-48 47
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0638 Protein 2e-40 47
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0197 Protein 6e-43 45
Mchl_0376 YP_002419241.1 transcriptional regulator BAC0308 Protein 8e-44 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mchl_0376 YP_002419241.1 transcriptional regulator VFG1389 Protein 2e-34 43
Mchl_0376 YP_002419241.1 transcriptional regulator VFG0596 Protein 4e-40 42
Mchl_0376 YP_002419241.1 transcriptional regulator VFG1390 Protein 2e-40 42