Gene Information

Name : Mchl_2209 (Mchl_2209)
Accession : YP_002420984.1
Strain : Methylobacterium chloromethanicum CM4
Genome accession: NC_011757
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2310728 - 2312356 bp
Length : 1629 bp
Strand : +
Note : PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: mex:Mext_1933 ABC transporter related

DNA sequence :
ATGTCCGATACGCTGCTGACCGTCGAGGATCTCTCGGTCGCCTTCCGCTCCGGGACGCGCGAGACCCGCGCGGTGGATCG
CGTCAGCTTCGCCATCGAGCGGGGCGAGACCCTGGCGCTGGTGGGCGAATCCGGCTCCGGCAAATCGGTCACCGCCCTGT
CGATCCTTCGCCTGCTCGACGGAGCGGCACACCATCCGGGCGGAAAAATCCTGTTCAAGGGGCGCGACCTGCTCACGCTG
CCCGAGCGCAAGATGCGTGCGGTGCGCGGCGCGGACATCACCATGGTGTTCCAGGAGCCGATGACCTCGCTCAACCCGCT
CCACTCCATCCAGCGGCAGATCGGCGAGGTGCTGGAGATCCACCGCGGCCTGAAGGGCAAGGCGGCGCGGGCCCGCATCC
TCGAACTCATGGATCTCGTCGGTATCCGGGACGCCGAGCGGCGGCTCGGCGCCTATCCGCACGAATTGTCCGGTGGTCAG
CGCCAGCGCGTCATGATCGCGATGGCGCTCGCCTGCGAGCCCGATCTCCTGGTGGCCGACGAGCCGACCACCGCCCTCGA
CGTCACCGTGCAGGCGCAGATTCTCGCGCTGCTGGCCGACCTGCAGAAGCGGCTCGGCATGGCGATGCTGTTCATCACCC
ACGATCTTGGCATCGTCCGGCGCATCGCCGACAGGGTCTGCGTGATGCTCGCCGGCCGGATCGTCGAGGCGGGCCCGGTC
GATCGGGTCTTCACCCGGCCCCAGCACGAATACACGCAAAGGCTGCTCGCCGCCGAGCCCACCGGCCGGGCGAACCCCGT
GCCCGATCACGCCGAAGAGCTGGTCGAGGCCGGGCCGCTCAAGGTGTGGTTCCCGCTCAAGGCGGGGCTGCTCCGGCGCA
CCGTCGGCCACGTCAAGGCGGTCGATGGGGTACGGCTCAGGGTGCGGGCGGGCGAGACGGTCGGCGTCGTCGGCGAATCC
GGCTCGGGCAAGACCACGCTCGGCCTCGCCCTGCTGCGGCTCACCGAATCCGAGGGGCCGATCGTGTTCCTCGGTCAGCG
CATCGAGGCGCGCGGTCCTGCCCTGATGCGGCCCCTGCGCAAGGACATGCAGGTGGTCTTCCAAGACCCCTACGGCTCGC
TCTCGCCACGCATGTCGGTGGGCGACATCGTCGCCGAGGGGTTGGCCGTGCAGGGGCTGGTGAAGGGCGGCGACGAGCGC
CGCGCCCTGGTGGCGAAGGCGCTCACCGATGTCGGGCTCGATCCGGCAGCGATGGACCGCTACCCGCACGAATTCTCCGG
CGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCCATCGTCCTGAAGCCCCGCTTCGTCGTCCTCGACGAGCCGACTTCGG
CGCTCGATCGCTCGGTGCAGGCGCAGATCGTGACGCTGCTGCGCGACCTCCAGCGCGAGCGGGGCATCGCCTACCTGTTC
ATCAGCCACGACCTCAAGGTGGTCCGCGCACTCTCCAACTACGTCATGGTGATGCAGCACGGCGAAGTGGTCGAGGAGGG
CCCGGCCGAAGAGATCTTTGCCGCGCCCAAGACCGATTATACCCGCACCCTGTTCGCGGCGGCCTTCGAGATGGATGCCG
CGACCACCGCCGAGATCGAGCCGGCCTAA

Protein sequence :
MSDTLLTVEDLSVAFRSGTRETRAVDRVSFAIERGETLALVGESGSGKSVTALSILRLLDGAAHHPGGKILFKGRDLLTL
PERKMRAVRGADITMVFQEPMTSLNPLHSIQRQIGEVLEIHRGLKGKAARARILELMDLVGIRDAERRLGAYPHELSGGQ
RQRVMIAMALACEPDLLVADEPTTALDVTVQAQILALLADLQKRLGMAMLFITHDLGIVRRIADRVCVMLAGRIVEAGPV
DRVFTRPQHEYTQRLLAAEPTGRANPVPDHAEELVEAGPLKVWFPLKAGLLRRTVGHVKAVDGVRLRVRAGETVGVVGES
GSGKTTLGLALLRLTESEGPIVFLGQRIEARGPALMRPLRKDMQVVFQDPYGSLSPRMSVGDIVAEGLAVQGLVKGGDER
RALVAKALTDVGLDPAAMDRYPHEFSGGQRQRIAIARAIVLKPRFVVLDEPTSALDRSVQAQIVTLLRDLQRERGIAYLF
ISHDLKVVRALSNYVMVMQHGEVVEEGPAEEIFAAPKTDYTRTLFAAAFEMDAATTAEIEPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-80 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-80 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-80 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-80 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-83 44