|
Name : Mchl_1089 (Mchl_1089) Accession : YP_002419918.1 Strain : Methylobacterium chloromethanicum CM4 Genome accession: NC_011757 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1102478 - 1103338 bp Length : 861 bp Strand : + Note : PFAM: integrase catalytic region; KEGG: mrd:Mrad2831_6485 integrase catalytic region DNA sequence : GTGACGTTCGCCTTCATCGAGCAGCATGCGAGCACCTGGCCGGTGCGTCTCATGTGCCGCGTGCTCGAAGTCTCCCCCAG CGGCTACTACGGCTGGCGGTCACGCCCCGAGAGCGCCCGGTCGGTGTCGAACCGTCAGCTCCTCGACGACGTCCGGCGGA TCCATGCCGAGCATCATAGGCGCTATGGCTCACCTCGAGTGCACGCGGCCTTGCGCGCTGAGGGCCGAACAGCCAGTCGC GGACGCGTGGAGCGTCTCATGCGTAGGCAAGGCATCCGAGCCCTGGCTGGGCGTCGGTTCCAGCCCTGCACGACCGACAG CCGTCACGACCTGCCGATCGCGCCCAATCTCCTCAAGCAGCTCTTCTCGGCCGCCCTGCCCAACATGGTCTGGCTGGCCG ATATCACCTATCTACCCACCGGCGAAGGCTGGCTCTACCTGGCCGCCGTGCTCGATCTCGCCACCCGCAAGATCGTCGGT TGGTCCATGCGCGACCACATGCGGACCGAGCTGACATCGGTCGCCCTGATGATGGCCACCCAACGGCAGCGACCGGCCGG TGGGCTCATCTGTCACTCGGATCGTGGCAGCCAATACGCCGCCGAGGCCGACCGAAAGCAGCTTGCCGACATGAAGGCGA CGCCCTCCATAAGCCGGACAGGCTGCTGCTACGACAACGCCCCAATGGAAAGCTTCTTCCACAGCCTCAAGGTCGAACTC GTTCACCAGCGACGATGGGCGACCCGGGACGAGGCCCGACGCGACTTGTTCGCCTACATCGAGGGCTACTACAATCGGCA GCGCATCCACTCGGCTCTCGGTTACATCACGCCCGAGCAAGCCGAACGGAATGCGAGCTAA Protein sequence : MTFAFIEQHASTWPVRLMCRVLEVSPSGYYGWRSRPESARSVSNRQLLDDVRRIHAEHHRRYGSPRVHAALRAEGRTASR GRVERLMRRQGIRALAGRRFQPCTTDSRHDLPIAPNLLKQLFSAALPNMVWLADITYLPTGEGWLYLAAVLDLATRKIVG WSMRDHMRTELTSVALMMATQRQRPAGGLICHSDRGSQYAAEADRKQLADMKATPSISRTGCCYDNAPMESFFHSLKVEL VHQRRWATRDEARRDLFAYIEGYYNRQRIHSALGYITPEQAERNAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 1e-49 | 47 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 8e-50 | 47 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 2e-49 | 47 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 2e-49 | 47 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 2e-49 | 47 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 2e-49 | 47 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 2e-49 | 47 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 2e-49 | 47 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 3e-48 | 46 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 1e-45 | 43 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-49 | 43 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-49 | 43 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-49 | 43 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 4e-48 | 43 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 1e-47 | 43 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 5e-48 | 43 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 6e-28 | 41 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 6e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mchl_1089 | YP_002419918.1 | integrase catalytic subunit | VFG1706 | Protein | 7e-50 | 47 |
| Mchl_1089 | YP_002419918.1 | integrase catalytic subunit | VFG1631 | Protein | 8e-46 | 43 |
