Gene Information

Name : rdgC (VS_0578)
Accession : YP_002416222.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 600014 - 600928 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAGAATTGCCTCGTCTATCGCTTTAATCGTGATATAGACTTCAACGCAGATCAGCTAGAGAAACAACTTGA
AGAGTTCCGTTTTACCCCATGTGGTAGCCAAGACAAACAGAAGTTTGGTTGGGTAAATGCGATGGGTAGACACGGCGATA
TGATGACGCACGTATCAGAAAACCGCATTCTCATCTGTGCAAAGAAAGAAGAGAAAATGCTTCCAGCTTCTGTGATCAAA
GATTCATTGAATGCAAAAGTAGAAACGCTTGAGGCAGAGTCTGGTACTCCTTTGAAAAAGAAAGAGAAAGACAGCCTAAA
AGAAGACATCATCATCGATCTTCTTCCTCGTGCTTTCAGCCGCAGTAACTTCACTTACGCGCTGATCATGCCGAAAGAAG
GCTTTATTGTTGTTGATGCTAGCAGCTACAAAAAAGCAGAAGACGTACTAGCATTACTACGTAAAACAATGGGTAGCTTG
CCAGTAGTGCCAGCTATTCCAGAGCAAGCGATTGAAACAACGTTAACGGAATGGGTTAAGTCAGGTGATACGCCTAAAGG
CATCACCATGCTTGATGAAGCTGAGCTTAAATCAATCCAAGAAGACGGCGGTATTGTTCGAGTTAAGAAACAAGAACTAG
AAGCTGATGAGATTAAGAACCACATCGAAGCCAATAAAGTTGTGACTAAACTTCTGATCAACTGGCAAGATCGCATTGAG
TTCATTCTTGCTGAAGATGGCAGCATCAAGCGTCTAAAATTCAGTGATGAACTAAAAGATGAGAACGACGATATTCCTCG
TGAAGATCAAGCTGCACGTTTTGATGCAGACTTCTCTCTACTTTGTGGTGAGTTCAGTGTTTTCCTACCAAACCTATTCG
AATCATTAGGCGGGTTAACTCAACCTAACGCTTAA

Protein sequence :
MWFKNCLVYRFNRDIDFNADQLEKQLEEFRFTPCGSQDKQKFGWVNAMGRHGDMMTHVSENRILICAKKEEKMLPASVIK
DSLNAKVETLEAESGTPLKKKEKDSLKEDIIIDLLPRAFSRSNFTYALIMPKEGFIVVDASSYKKAEDVLALLRKTMGSL
PVVPAIPEQAIETTLTEWVKSGDTPKGITMLDEAELKSIQEDGGIVRVKKQELEADEIKNHIEANKVVTKLLINWQDRIE
FILAEDGSIKRLKFSDELKDENDDIPREDQAARFDADFSLLCGEFSVFLPNLFESLGGLTQPNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 4e-65 52