Gene Information

Name : pilD (VS_2550)
Accession : YP_002418132.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Virulence
Product : type IV prepilin-like proteins leader peptide processing enzyme
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : -
Position : 2742960 - 2743829 bp
Length : 870 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in another organism; Product type pt : transporter

DNA sequence : 
ATGGAAGTATTTCACTACTATCCTTGGCTATTCCCCGTATTAGCTTTCATTTTTAGCCTTCTTATTGGCAGTTTCCTCAA
CGTAGTCATACACCGTTTACCGATTATGATGGAACGAGAGTGGCAACAAGAGTGCTCGGAGTATTTCTCTCAATATAAAA
TTCCAGCGCCAGAGGGGAAGTTCAATCTCAGTATCCCTCGTTCGGCTTGCCCGAAATGTAAAACCCAATTAAGAATCGTC
GACAATGTTCCAGTATTAAGCTGGTTGTTCTTGAAAGGTAAGTGTCATAGCTGTGCTAACCCAATCAGTGCTCGCTATCC
ATTGGTCGAACTGCTGACTGCAATACTATGCACCGTAGTGGCTAGCCACTTTGGTTTCAATTACTACGCCATTGCTTTGA
TTTTTTTCACCTTTGCATTGATTGCCGCAACCTTTATCGACCTAGATACCATGCTGTTACCTGATCAAATCACCTTACCT
TTGGTTTGGTCTGGTATCGCGTTAGCACTGTTTAACATCAGCCCAGTATCGCTTCAAGATTCCGTAGTTGGCGCAATGGC
CGGCTACCTAGCTTTGTGGTCTGTTTATTGGTTGTTCAAGCTACTAACAGGCAAAGAAGGCATGGGATATGGAGACTTCA
AACTCCTAGCCGCATTAGGTGCATGGCTTGGCTGGCAACACCTACCAATGATCATTCTTTTGTCGTCGCTGGTCGGTTTG
GTTTTCGGCTTGATTCAACTTCGCTTGAAACAGCAAGGCATAGATAAAGCGTTCCCATTTGGACCTTACCTGGCGATTGC
GGGTTGGGTAAGTTTGATGTGGGGCAATGACATCATGGGTTGGTATTTCACTTCTGTACTAGGGATTTAA

Protein sequence : 
MEVFHYYPWLFPVLAFIFSLLIGSFLNVVIHRLPIMMEREWQQECSEYFSQYKIPAPEGKFNLSIPRSACPKCKTQLRIV
DNVPVLSWLFLKGKCHSCANPISARYPLVELLTAILCTVVASHFGFNYYAIALIFFTFALIAATFIDLDTMLLPDQITLP
LVWSGIALALFNISPVSLQDSVVGAMAGYLALWSVYWLFKLLTGKEGMGYGDFKLLAALGAWLGWQHLPMIILLSSLVGL
VFGLIQLRLKQQGIDKAFPFGPYLAIAGWVSLMWGNDIMGWYFTSVLGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 1e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilD YP_002418132.1 type IV prepilin-like proteins leader peptide processing enzyme VFG0114 Protein 2e-42 55
pilD YP_002418132.1 type IV prepilin-like proteins leader peptide processing enzyme VFG0234 Protein 3e-37 49
pilD YP_002418132.1 type IV prepilin-like proteins leader peptide processing enzyme VFG1882 Protein 2e-40 47
pilD YP_002418132.1 type IV prepilin-like proteins leader peptide processing enzyme VFG2428 Protein 6e-35 47