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Name : pilB (VS_2548) Accession : YP_002418130.1 Strain : Genome accession: NC_011753 Putative virulence/resistance : Virulence Product : type IV pilin assembly protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2739955 - 2741649 bp Length : 1695 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in another organism; PubMedId : 1971619, 10984043; Product type pm : membrane component DNA sequence : CTGTGTGTAGTGCTAACCAACCTCCCAACAGTTCTCCGTCAGGCTAACTTACTTAGCCTGACTCAAGAACAAGCCGTTGC GGAACATGTACAAGCTTCAGGTATTTCTACACCTGAAGCTTTGCTCACTCTGGGCTTATTCACCAGCGAGAGCCTCGCTA ATAACATCAAAACCATTTTCGGTTTGCCGTTAGTGCAACTGGCCAATACTGACTATGAAATCTTGTGTGACCAATTGGGA CTTCGAGAATTGATCACTAAGTATCGTGCTATCCCAGTTGTCCTCACTAACTCTACTCTCACGCTCGCCTCTGCCGATCC AACCGACTTGCAAGCTGAAGACGATTTTAGATTCGCGACTGGATTGCAGATAGAACTCGTTGTCGCTAACTATTCAGAAT TAGAAGGCGCCATACGAAAGCTGTATGGTCGCTCTATTTCCGGGCAAGACTCTAAGCGCAAAGAGATCACCCAAGATGAG CTCGCCAATCTTGTTGAAGTCTCTGACGATGAAATGAGTTCAATTGAAGATCTCAGTCAAGACGATTCCCCTGTCAGTCG ATTTATCAATCAGATACTGGTTGATGCGGTGCGTAAAGGCGCATCAGACATCCACTTCGAACCTTATGAAGAAAACTACC GAGTGCGTCTGCGTTGCGATGGCATTCTTGTTGAGGTCCAACAGCCCGCGTCTCATTTAAGCCGTCGGTTATCCGCTCGT TTAAAGATTCTCGCCAAACTTGATATCGCTGAACGTCGCTTACCTCAAGACGGCCGTATTAAGCTGCGTTTGAACGACGA GCTGGCGATCGATATGCGTGTGTCGACTCTACCGACATTGTGGGGAGAAAAGATCGTACTGCGTCTTCTAGACAGCAGCG CAGCCAATTTAGATATCGATAAATTAGGTTACAGCGAGGATCAAAAAGCGCTCTATCTCAATGCCCTAAAACGCCCGCAA GGGATGATCTTAATGACTGGGCCCACAGGCAGTGGCAAAACGGTCTCTCTTTACACTGGACTTCGCATGCTTAACACCTC TGAGCGTAATATCTCAACAGCTGAAGATCCGGTGGAGATCAACCTGTGTGGTATCAATCAGGTACAGGTGACGCCAAAGA TCGGTTTTGGGTTTGCCGAAGCACTACGATCGTTCTTGCGACAAGACCCTGATGTAGTGATGGTCGGTGAGATCCGTGAT TTAGAAACCGCAGAGATCGCGATCAAAGCGTCGCAAACGGGTCACTTAGTCCTCTCGACACTCCATACTAACTCAGCTTC GGAAACCGTGACTCGGCTCGCCCATATGGGGATTGAGCCCTTTAACCTCGCTTCGTCATTGAGCCTGATTATCGCGCAGC GACTGGCAAGGCGACTGTGCAACCACTGTAAAGCAGCTGACAACTCGCCGGACATATTTTTACGTCACTCTATTCCTAAT AGCCAAAACATCTACCAAGCCAATCCTCAAGGATGCAATGAGTGTAATCAGGGTTACTCCGGTCGAGTGGGTATCTACGA AGTGATGCCGTTTACCGACAAACTAAAAAATAGTCTGATTAATAAACCTAACGCGTTAGAGATTGAAGATCTCGCGCGTA GAGAAGGAATGAGAACACTGCAAGAATCCGGTATCGATAAGTTGCTTGAAGGCACCACCAGCTATCAAGAACTGCAACGT GTTCTGTATCTATAA Protein sequence : MCVVLTNLPTVLRQANLLSLTQEQAVAEHVQASGISTPEALLTLGLFTSESLANNIKTIFGLPLVQLANTDYEILCDQLG LRELITKYRAIPVVLTNSTLTLASADPTDLQAEDDFRFATGLQIELVVANYSELEGAIRKLYGRSISGQDSKRKEITQDE LANLVEVSDDEMSSIEDLSQDDSPVSRFINQILVDAVRKGASDIHFEPYEENYRVRLRCDGILVEVQQPASHLSRRLSAR LKILAKLDIAERRLPQDGRIKLRLNDELAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYSEDQKALYLNALKRPQ GMILMTGPTGSGKTVSLYTGLRMLNTSERNISTAEDPVEINLCGINQVQVTPKIGFGFAEALRSFLRQDPDVVMVGEIRD LETAEIAIKASQTGHLVLSTLHTNSASETVTRLAHMGIEPFNLASSLSLIIAQRLARRLCNHCKAADNSPDIFLRHSIPN SQNIYQANPQGCNECNQGYSGRVGIYEVMPFTDKLKNSLINKPNALEIEDLARREGMRTLQESGIDKLLEGTTSYQELQR VLYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-86 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-87 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG0112 | Protein | 5e-129 | 53 |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG1880 | Protein | 2e-115 | 49 |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG0182 | Protein | 3e-85 | 49 |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG2048 | Protein | 5e-87 | 49 |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG1876 | Protein | 4e-79 | 47 |
| pilB | YP_002418130.1 | type IV pilin assembly protein | VFG0233 | Protein | 1e-101 | 45 |
