|
Name : VS_2043 (VS_2043) Accession : YP_002417644.1 Strain : Genome accession: NC_011753 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2190468 - 2191775 bp Length : 1308 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGATTCTAAATTACTTCGAGCTGAGCTGGATGAAACAGCGGCAAAATTAGCACGTCGAGGCTTCCCCCTTGATGT AGAGACAATTCGTGAACTTGAAGAAAAACGTAAGTCCCTTCAGATGAAAACTGAAGAGCTACAAGCGTTACGTAACTCTC GATCGAAGTCCATTGGTCAAGCGAAAGCAAAAGGCGACCATGAAGAAGCTGAGCGTATCCTTGCAGAAGTAGGCAACTTA GGCGCAGAACTAGACCAAGCTAAAGTAACATTGGCTGAGCTTCAATCTGAGCTAGAAACGATCACAATGTCAATTCCTAA CCTACCTGACGCAGAAGTGCCAGATGGTAAAGATGAAGACGACAACGTAGAAGTTTCTCGTTGGGGTCAACCTAAGACTT ACGACTTCGAAGTGAAAGATCACGTGGATCTTGGCGAAATGTCTGGCGGTCTTGATTTTGCTAGCGCAGTTAAAATCTCT GGTTCTCGTTTCATCGTGATGAAAGGCAAATTCGCACGTCTACACCGTGCTATTGCTCAATTCATGCTGGACCTTCACAC TGATGAGCACGGCTATACAGAAATGTACGTACCGTACCTAGTGAACCACGATAGCCTTTACGGTACTGGTCAACTTCCTA AGTTCGGCGAAGACTTGTTCCACACAAGTCCGCTAACTGAGCAAGTAAGTGACGTGCCTCTTAAGACGTTATCGCTTATC CCTACTGCGGAAGTGCCGGTAACGAACATGGTTCGTGACACGATTACTGATGAAGCTGAACTGCCACTTAAGATGACAGC TCACACACCATGTTTCCGTTCTGAAGCGGGTTCTTACGGACGTGACACTCGTGGTCTTATCCGTATGCACCAATTCGACA AAGTTGAATTAGTACAAATTACTAAGCCAGAAGACTCAATGGCAGCGCTTGAAGAGCTAACTGGTCACGCTGAGAAAGTA CTTCAACTTCTAGAGCTTCCTTACCGTAAAGTGATTCTATGTACGGGTGACATGGGCTTCGGTTCTGCGAAAACTTACGA CTTAGAAGTGTGGGTTCCAGCACAAGAGACATACCGTGAAATTTCTTCTTGTTCAAACATGTGGGATTTCCAAGCGCGTC GTATGCAAGCTCGTTTCCGTCGTAAAGGCGAGAAGAAACCTGAACTTGTACACACACTTAACGGTTCTGGTCTTGCTGTT GGTCGTACTATGGTTGCTATTCTTGAGAACAACCAAGAAGCAGATGGCCGTATTGCTATCCCAACAGTACTTCAACCATA CATGGGCGGCGTAACGCACATCGGTTAA Protein sequence : MLDSKLLRAELDETAAKLARRGFPLDVETIRELEEKRKSLQMKTEELQALRNSRSKSIGQAKAKGDHEEAERILAEVGNL GAELDQAKVTLAELQSELETITMSIPNLPDAEVPDGKDEDDNVEVSRWGQPKTYDFEVKDHVDLGEMSGGLDFASAVKIS GSRFIVMKGKFARLHRAIAQFMLDLHTDEHGYTEMYVPYLVNHDSLYGTGQLPKFGEDLFHTSPLTEQVSDVPLKTLSLI PTAEVPVTNMVRDTITDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQITKPEDSMAALEELTGHAEKV LQLLELPYRKVILCTGDMGFGSAKTYDLEVWVPAQETYREISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAV GRTMVAILENNQEADGRIAIPTVLQPYMGGVTHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-96 | 55 |
