Gene Information

Name : VS_1956 (VS_1956)
Accession : YP_002417559.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2099836 - 2100480 bp
Length : 645 bp
Strand : -
Note : in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v

DNA sequence : 
TTGATAAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGGGAAGCTGAAAGCGGTGAAGATGCTGCAAAATGGTGTCGTACTAACAATACTGACGTTATTTTGATGG
ATATGAATATGCCTGGTATTGGTGGCTTAGAAGCAACCAAGAAAATCTTGCGTTTCAACCCTGATGTTAAAATCATCGTT
TTAACTGTTCATACGGAAAATCCGTTTCCAACTAAAGTGATGCAAGCTGGAGCTGCTGGTTACCTTACTAAAGGGGCAGG
TCCGGATGAAATGGTAAATGCAATTCGAGTGGTTAATAGTGGCCAACGATACATTTCGCCAGAAATTGCGCAGCAGATGG
CTTTGAGCCAATTCTCGCCTGCGTCTGAAAATCCATTCGCAGACTTATCTGAACGTGAGCTTCAAATCATGATGATGATT
ACCAAAGGTCAGAAAGTGACGGATATTTCAGAACAACTCAATCTAAGTCCTAAAACAGTCAACAGTTACCGCTACCGCTT
GTTCAGTAAGCTGGATATCAGTGGCGATGTAGAGCTGACGCATTTAGCGATTAGACATGGAATGTTAGACACTGAGACCC
TTTAA

Protein sequence : 
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEAESGEDAAKWCRTNNTDVILMDMNMPGIGGLEATKKILRFNPDVKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMMMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDISGDVELTHLAIRHGMLDTETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-49 50
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-49 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_1956 YP_002417559.1 response regulator VFG1889 Protein 3e-54 51