Gene Information

Name : VS_1669 (VS_1669)
Accession : YP_002417280.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1795776 - 1797017 bp
Length : 1242 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in another organism; Product type h : extrachromosomal origin

DNA sequence : 
ATGGCGAAAAAAGTACAGCCTTTAACGGCAACTCAAATCAAACAAGCGAAGCCTAAAGAGAAAGAATATAATTTAGGTGA
CGGTGATGGATTATCATTGAAGATTAAGCCTATAGGAACAAAACTCTGGCGTTTCTCTTATTATCATCCCATTTCACGAA
AGCGCTTGAACCTAGCCTTAGGTAAGTACCCTGACGTCTCACTAGCCAAAGCTCGAACCAAAGCTATTGAAGCTAGAGAA
CTACTTGCTGATGGTATTGACCCTAAAGAGCACCGTGATGCGACACTCAGAGAAAAACAGTTAGAATTGGCGAATACGTT
ACAGTCGGTATTTGATGACTGGATTGAAGTGAAGAGAACAAGCGTCAAAGAGCAAACGGCTAAGAAGCTAAAGCAACGAA
TTGAGAAGTACCTCTTACCTGATCTTGGTAAGTTCCCCCTTAGTGACATTACGGCACCACAAGCGATAAAAACAATTAAA
CCCATTGCGAATCAAGGTAAATTAGAAACAGTAGGGCGTTTGTGTCGTAACCTCAATGAGATAATGACCTTTGCAGTAAA
CACGGGTGTGATTGAACACAACAAGCTTGCTGGCATTGGTAAAGCATTTGAGACTGCTAAGGTAACCAACCAAGCTTCGT
TAGCCCCAGATGAGCTTCCAGAGCTTCTCAAAACCATCAACTACGCATCGATTAAACCCATCACTCGCTGCTTGCTAGAA
TGGCAACTTCACACAATGACAAGGCCAGCTGAAACGGCTGGGGCACGTTGGGATGAAATTGACAGAGAAAAGATGCTTTG
GGTAATTCCTGCTGAACGAATGAAAAAGGGAAGAGTGCATACTGTTCCTTTAACAAAACAAACTCTAGATCTATTGGAAA
CCATTGATTTCATCACGGGTGATAGTGAATACCTTTTCCCAGCAGACAAAAGTAACAAAAATCACATCAACAAAGAGACA
GCAAATAAAGCATTGGTACGAATGGGCATGAAGGGTAGGCAAACTTCTCACGGTTTGCGCGCATTAGCCAGTACCACCTT
AAATGAGCAAAACTTCGATCCAGATATTATAGAAGCCGCACTTTCTCATGTGGATAGAGACAAGGTAAGAAGCGCATACA
ACCGCACTGATTACCTTGAACGCCGTAAAGTTCTAATGGCGTGGTGGAGTGATCATATCGAAGAAGCTGCTTCGGGGAGC
TTGTCGATGAGTGGTAAAAAGAGCCTGAAGGTTGTGGGTTAA

Protein sequence : 
MAKKVQPLTATQIKQAKPKEKEYNLGDGDGLSLKIKPIGTKLWRFSYYHPISRKRLNLALGKYPDVSLAKARTKAIEARE
LLADGIDPKEHRDATLREKQLELANTLQSVFDDWIEVKRTSVKEQTAKKLKQRIEKYLLPDLGKFPLSDITAPQAIKTIK
PIANQGKLETVGRLCRNLNEIMTFAVNTGVIEHNKLAGIGKAFETAKVTNQASLAPDELPELLKTINYASIKPITRCLLE
WQLHTMTRPAETAGARWDEIDREKMLWVIPAERMKKGRVHTVPLTKQTLDLLETIDFITGDSEYLFPADKSNKNHINKET
ANKALVRMGMKGRQTSHGLRALASTTLNEQNFDPDIIEAALSHVDRDKVRSAYNRTDYLERRKVLMAWWSDHIEEAASGS
LSMSGKKSLKVVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-107 56
int AAK20773.1 integrase Not tested VPI Protein 5e-105 55
int AAK20803.1 integrase Not tested VPI Protein 5e-105 55
unnamed AAA82714.1 integrase Not tested VPI Protein 5e-105 55
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 7e-105 55
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 7e-105 55
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-94 51
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-94 51
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-94 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_1669 YP_002417280.1 phage integrase VFG1092 Protein 4e-95 51