Gene Information

Name : VS_1654 (VS_1654)
Accession : YP_002417265.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Virulence
Product : prophage protein; DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1787719 - 1787934 bp
Length : 216 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence :
ATGAGGACCACAGGCATAGGAGAACGTCCCATGAGATTTTTAAAGCTAAAAGAAGTGATTGAGAAAACTGCATTAAGCCG
CTCGGCGATATACAGAAAAATGGACGAAGGTAATTTTCCTGTATCGGTAAGCTTGGGAGATAGGGCGGTCGCTTGGGTAG
AAGAAGAGGTGAATAACTGGATGGAAATGCGCTTGGCTGAAAGACCAAGCCATTAA

Protein sequence :
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNWMEMRLAERPSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-20 71
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-20 71
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-20 71
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 2e-13 59
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 5e-09 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-12 45
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-12 45
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 4e-10 44
unnamed CAA21398.1 - Not tested HPI Protein 5e-10 44
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 3e-12 43
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_1654 YP_002417265.1 prophage protein; DNA-binding protein VFG1118 Protein 1e-20 71
VS_1654 YP_002417265.1 prophage protein; DNA-binding protein VFG1141 Protein 4e-13 45