Gene Information

Name : VS_0158 (VS_0158)
Accession : YP_002415842.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 151261 - 153351 bp
Length : 2091 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGAGCCTTGTTATGTCACAGCTTTTCTCTGCTATCCCTCTCAACTCTTTATCTGGAGTCGGCGCAAAAGTCGCAGAGAA
ACTGGAAAAGGTTGGGCTTAACAATGTACAAGACCTGCTATTTCACCTACCTCTGCGCTATGAAGATAGAACTCGTATCT
ATCCCATCGTAAAGCTGCATGCCGGGCTGTGGGCTGCTGTACAAGGGAAGGTGATGCATGTTGATACCATTTTCGGTAAA
CGTAAGATGCTTGCAGTAAAGATCAGCGATGGTAACGGCACCATCACCCTACGCTTTTTCAACTTCACCGCCGGTATGAA
GAATAACTTTGCCGAAGGCAAACAAGTGCATGCTTATGGTGAGATCAAGCGCGGCAATATGGGGCTTGAGATTGTCCATC
CGGATTACAAATTCTTTGCTCCTAGGCAACAACCAGACGTTGAAGCCAACCTGACTCCGGTGTATCCAACCACTGAAGGG
CTAAGACAAGTCACGCTACGTAACCTTACAGATCAAGCCTTGGAGTTAATCGACAAGGCAGCGGTTAATGAGCTTTTACC
ATCAGGCTTATACGACCACCAAATTACCCTCGCACAAGCTCTGCATACCATTCACAGGCCGCCCCCGGGCATTGACCTAG
AGCTGTTTGATGAAGGCAAGCACCCTGCTCAACTGCGACTAATTATGGAAGAGCTACTGGCTCAAAATCTGTCTATGTTG
TCTGTTCGTAGCAAAGGGCAGCAAGACAAGGCAATGCCTTTTCCTCCAGTAAACACTCTTAAAGATAAGCTACTGGCTCA
GCTGCCGTTTTCACCAACCAATGCCCAAGCACGAGTGACCAAAGAGATCGAAGCTGACTTGGAAAAGCCGCACCCTATGA
TGCGTTTAGTGCAAGGTGATGTGGGCTCTGGTAAAACCTTAGTCGCTGCACTCGCGGCGGTTCGCGCACTCGAACACGGT
CAGCAAGTAGCACTTATGGCACCCACTGAACTACTCGCAGAACAACACGCGATTAACTTTGCCAACTGGTTTGAGGCAAT
GGGTATTCAAGTTGGATGGCTAGCAGGTAAGCTCAAAGGCAAAGCTCGTGAAACTGAACTAACACGTATTGCCAGCGGCG
AAGCGCAAATGGTGGTGGGAACTCATGCGCTATTTCAAGAGCATGTCGAATTCAAAAACCTTGGCTTAGTGATCATCGAT
GAGCAGCACCGATTTGGTGTCCACCAGCGATTAGAGCTGCGTGAAAAAGGCGCGAAGCAAGGTTATTACCCTCACCAACT
GGTGATGACCGCGACCCCAATCCCACGAACGTTAGCAATGACGGCCTATGCCGATCTTGAAACTTCTATTATTGATGAGT
TACCACCGGGGCGAACCCCAATTCAAACCGTCGCGATTCCTGATACCAAGCGCGATGACATTGTTGAACGTGTGAAAAAT
GCGTGTCTCAATGAAGGCAAACAAGCTTACTGGGTGTGTACGTTGATTGATGAATCGGAAGTACTGGAAGCTCAAGCTGC
AGCGGATACGGCAGAAGAGCTGCAACGCAAACTGCCCGACGTAAAAATTGGTTTGGTTCATGGCAGAATGAAACCCGCAG
AGAAACAAGCGGTGATGCAGGAATTCAAAGAGAACAAACTGCACCTGTTAGTTGCTACAACCGTGATTGAAGTAGGTGTG
GATGTACCGAATTCGAGCTTAATGATCATCGAGAACCCAGAGCGTCTTGGTCTAGCGCAACTGCACCAACTGCGTGGTCG
TGTTGGCCGTGGTTCGGTCGCAAGCCATTGTGTACTGTTGTACCACTCCCCACTCTCTAAAACCGCTCAGAAACGCTTAG
GGGTACTTCGTGAAAGTAACGATGGCTTTGTGATAGCTCAGCGTGACTTAGAGATCCGTGGCCCCGGTGAGCTACTTGGC
ACTAAACAAACAGGCTTGGCTGACTTTAAGATTGCCGACTTAGTCCGTGACCAACGTTTGATACCTGAAGTGCAGCGTAT
CGCGCGTCATATCCACGATAGCTACCCAGACAATGCCAAGGCGATCATCAACCGCTGGCTGGGTGAGCGCGATGTGTATT
CTAAGGCGTAA

Protein sequence :
MSLVMSQLFSAIPLNSLSGVGAKVAEKLEKVGLNNVQDLLFHLPLRYEDRTRIYPIVKLHAGLWAAVQGKVMHVDTIFGK
RKMLAVKISDGNGTITLRFFNFTAGMKNNFAEGKQVHAYGEIKRGNMGLEIVHPDYKFFAPRQQPDVEANLTPVYPTTEG
LRQVTLRNLTDQALELIDKAAVNELLPSGLYDHQITLAQALHTIHRPPPGIDLELFDEGKHPAQLRLIMEELLAQNLSML
SVRSKGQQDKAMPFPPVNTLKDKLLAQLPFSPTNAQARVTKEIEADLEKPHPMMRLVQGDVGSGKTLVAALAAVRALEHG
QQVALMAPTELLAEQHAINFANWFEAMGIQVGWLAGKLKGKARETELTRIASGEAQMVVGTHALFQEHVEFKNLGLVIID
EQHRFGVHQRLELREKGAKQGYYPHQLVMTATPIPRTLAMTAYADLETSIIDELPPGRTPIQTVAIPDTKRDDIVERVKN
ACLNEGKQAYWVCTLIDESEVLEAQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQEFKENKLHLLVATTVIEVGV
DVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHSPLSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLG
TKQTGLADFKIADLVRDQRLIPEVQRIARHIHDSYPDNAKAIINRWLGERDVYSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-102 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VS_0158 YP_002415842.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 58