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Name : VS_0135 (VS_0135) Accession : YP_002415820.1 Strain : Genome accession: NC_011753 Putative virulence/resistance : Virulence Product : type II secretory pathway subunit EpsD Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 129296 - 131320 bp Length : 2025 bp Strand : + Note : - DNA sequence : GTGAAGCATTGGTTTAAGAAAAGTGCATGGTTATTGGCAGGAAGCTTAATCTGCACACCCGCCGCCATCGCGAGTGATTT TAGTGCCAGCTTTAAAGGCACTGATATTCAAGAGTTTATTAATATTGTTGGCCGTAATCTAGAGAAGACGATCATCGTCG ACCCTTCGGTGCGCGGAAAAATCGATGTACGTAGCTACGACGTACTCAATGAAGAGCAATATTACAGCTTCTTCTTAAAC GTATTAGAAGTGTACGGCTATGCAGTCGTTGAAATGGACTCGGGTGTTCTTAAGATCATCAAAGCGAAAGATTCAAAAAC CTCGGCAATCCCAGTTGTTGGCGACCGTGATTCGATCACAGGCGACAGCGTTGTGACACGTGTTGTTACGGTTCGTAATG TCTCGGTTCGTGAGCTATCTCCTCTGCTTCGTCAACTGAATGACAACGCGGGCGCGGGTAACGTGGTGCACTACGATCCT GCAAATATCATCTTGATTACCGGCCGAGCGGCGGTTGTAAACCGTTTAGCTGAAATCATCAAGCGTGTAGACCAAGCTGG TGATAAAGAGATCGAAGTTGTTGAACTGAAAAATGCTTCCGCCGCGGAGATGGTGCGCATTGTCGATGCATTAAGCAAAA CCACAGATGCTAAAAACACCCCTGCTTTCCTACAGCCTAAATTAGTTGCTGATGAGCGTACCAATGCAATTCTTATCTCA GGCGACCCTAAAGTACGCAGTCGTTTAAGAAAGTTGATTGAACAGCTTGATGTGGAAATGGCGACTAAGGGTAACAACCA AGTTATCTACCTTAAATACGCAAAAGCGGAAGACTTAGTTGATGTGCTGAAAGGCGTGTCTGACAACCTGCAATCAGAGA AACAAACGTCAACCAAAGGCAGTTCATCGCAGCGCAACCAAGTGATGATTTCGGCTCACAGCGATACTAACTCATTGGTG ATTACCGCACAGCCAGACATCATGAACGCGCTGCAAGACGTGATCGCTCAACTCGATATCCGTCGTGCTCAAGTGTTGAT TGAAGCCTTAATTGTTGAAATGGCAGAAGGTGACGGCGTTAACCTAGGTGTGCAGTGGGGCAACCTAGAAACGGGAGCCA TGATTCAGTACAGCAATACCGGTGCATCGATTGGCGGTGTGATGGTGGGTCTAGAAGAAGCAAAAGATAAAACGGTTGAT CGAGTTGTAACTCCAAGTGATGGATCGAAACCCTATACGGTGAAAGAGACAGAAAAGGGTGACTATTCAACGTTAGCATC TGCTCTTTCTGGCGTTAATGGTGCAGCAATGAGTGTGGTCATGGGCGACTGGACAGCTTTGATCAGTGCGGTAGCAACCG ATTCAAACTCAAACATTCTGTCTTCTCCAAGTATCACGGTAATGGATAACGGCGAGGCTTCATTCATTGTGGGTGAAGAG GTGCCCGTTCTAACCGGTTCTACAGCAGGTTCAAGCAACGATAATCCATTCCAAACTGTTGAACGTAAAGAAGTGGGTAT TAAGCTAAAAGTCGTGCCGCAAATCAATGAAGGTGACTCGGTTCAACTGCAAATAGAACAAGAAGTATCGAACGTATTAG GGGCAAACGGGGCAGTAGATGTTCGTTTTGCTAAGCGTCAGCTAAATACGTCAGTGATTGTTCAAGATGGTCAAATGCTG GTGTTGGGTGGCCTGATTGATGAGCGCGCATTGGAGAGTGAGTCTAAGGTCCCATTCTTGGGTGATATTCCTGTTCTTGG ACACCTGTTCAAATCAACCAGTACTCAGGTTGAGAAAAAGAACCTAATGGTATTCATCAAGCCAACCATTATTCGTGATG GCATGACTGCAGATGGTATCACGCAGCGCAAATACAACTTTATTCGTGCTGAGCAACTGTACAAGGCAGAGCAAGGCTTG AAACTGATGGCTGACGATAATATCCCTGTGTTACCTAAATTTGGTGAAAGCATGAATCATCCTGCTGAAATCCAAGCCTT CATCGATCAAATGGAAGCAGAATAA Protein sequence : MKHWFKKSAWLLAGSLICTPAAIASDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEEQYYSFFLN VLEVYGYAVVEMDSGVLKIIKAKDSKTSAIPVVGDRDSITGDSVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDP ANIILITGRAAVVNRLAEIIKRVDQAGDKEIEVVELKNASAAEMVRIVDALSKTTDAKNTPAFLQPKLVADERTNAILIS GDPKVRSRLRKLIEQLDVEMATKGNNQVIYLKYAKAEDLVDVLKGVSDNLQSEKQTSTKGSSSQRNQVMISAHSDTNSLV ITAQPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDGVNLGVQWGNLETGAMIQYSNTGASIGGVMVGLEEAKDKTVD RVVTPSDGSKPYTVKETEKGDYSTLASALSGVNGAAMSVVMGDWTALISAVATDSNSNILSSPSITVMDNGEASFIVGEE VPVLTGSTAGSSNDNPFQTVERKEVGIKLKVVPQINEGDSVQLQIEQEVSNVLGANGAVDVRFAKRQLNTSVIVQDGQML VLGGLIDERALESESKVPFLGDIPVLGHLFKSTSTQVEKKNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAEQGL KLMADDNIPVLPKFGESMNHPAEIQAFIDQMEAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-161 | 54 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-170 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VS_0135 | YP_002415820.1 | type II secretory pathway subunit EpsD | VFG2047 | Protein | 2e-160 | 53 |
