Gene Information

Name : viuC (VS_1126)
Accession : YP_002416741.1
Strain :
Genome accession: NC_011753
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1191607 - 1192419 bp
Length : 813 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in another organism; PubMedId : 10515929; Product type t : transporter

DNA sequence : 
ATGAGCCTATCGACACCGGTTAAATCTAAAATCACCTCTCGACTAAATGGAAGTAACCTTAAACTTGCATACGAGAATCG
CGTTATTTGTGAAAATCTCGAACTTCATATTCCTGAAGGTAAATTTACGGTCATTGTCGGACCCAACGGGTGCGGAAAGT
CGACCTTATTGAGAAGCTTATGCCGTTTATTGAAACCTTCTAAAGGCCAAATTTATCTAGATGGTCAGAATATCCAAAAA
GTACCAGCTAAAGAGTTGGCGAGAGAGTTGGGGTTACTTCCCCAAAGTTCACAAGCTCCAGAAGGGATTCGAGTCGTTGA
TTTGGTAGCAAGAGGCCGCTACCCGCATCAAAAACTGTTTAAGCAGTGGAGCTTAGATGATCAAGAGGCGGTCTTCCAAG
CGCTGGAAGATACTGGTGTCACCGATTTGGCCGAGAGGCAGGTTGATGAACTATCAGGAGGTCAGAAACAACGAGTTTGG
ATCGCAATGGTATTAGCACAAAAGACACCGATAGTATTACTTGATGAGCCGACAACTTATTTGGACGTCGCACACCAGAT
CGATTTGTTGGAGTTGTTCCGCAGCCTCAATAGAGAGAAAAAACACACTATCGTCGCCGTGCTCCATGATTTGAATCAAG
CCTGTCGTTATGCGGATCATCTGATTGCATTTGCTGGTGGAGAAATTGTCGCACAAGGGGAACCTAAGTCTTTAATTGAC
GCCAAACTCGTTAAGCAAGTATTTGGCTTAGATAGCGTTATTATTGATGATCCCGTAAGTCATACTCCATTGATTGTGCC
TTTGGGGAAGTAA

Protein sequence : 
MSLSTPVKSKITSRLNGSNLKLAYENRVICENLELHIPEGKFTVIVGPNGCGKSTLLRSLCRLLKPSKGQIYLDGQNIQK
VPAKELARELGLLPQSSQAPEGIRVVDLVARGRYPHQKLFKQWSLDDQEAVFQALEDTGVTDLAERQVDELSGGQKQRVW
IAMVLAQKTPIVLLDEPTTYLDVAHQIDLLELFRSLNREKKHTIVAVLHDLNQACRYADHLIAFAGGEIVAQGEPKSLID
AKLVKQVFGLDSVIIDDPVSHTPLIVPLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-65 53
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-62 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-62 50
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-67 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-67 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-67 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-67 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-53 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-47 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
viuC YP_002416741.1 iron-siderophore uptake ABC transporter ATP-binding protein BAC0164 Protein 4e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
viuC YP_002416741.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG0925 Protein 2e-80 60
viuC YP_002416741.1 iron-siderophore uptake ABC transporter ATP-binding protein VFG1042 Protein 4e-53 47