Gene Information

Name : yfdH (ECUMN_0913)
Accession : YP_002411667.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 952072 - 953001 bp
Length : 930 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 12878731, 13129938, 9689094; Product type h : extrachromosomal origin

DNA sequence :
ATGAAAATTTCTTTAGTCGTTCCGGTCTTTAACGAAGAGGCCACGATACCTATTTTTTATAAAACCGTGCGCGAATTTGA
AGGGCTTCAGCAGCATGAAGTCGAGATAGTCTTCATAAACGATGGCAGCAAAGACGCTACAGAATCAATTATCAACGAGC
TTGCTGTTGCCGACCCGCTTGTGGTTTCGCTGTCGTTCACACGTAACTTCGGCAAAGAACCCGCCCTGTTCGCAGGTCTG
GACCATGCTACCGGGGAGGCAATTATCCCGATTGACGTTGATCTGCAAGACCCTATCGAAGTTATTCCTCACTTGATAGA
GAAATGGCAGGCCGGTGCAGATATGGTTCTGGCTAAACGCTCTGACCGCTCCACTGACAGCAGGCTGAAGCGTAAATCTG
CTGAGTGGTTCTATAAACTTCATAACAAAATCAGCAACCCTCAGATAGAAGAGAATGTTGGCGACTTCCGGCTCATGTCT
CGCGAAGTAGTAGAAAATATTAAGCTCATGCCAGAACGAAACCTGTTTATGAAGGGTGTGCTGAGCTGGGTTGGTGGTCG
AACCGATGTCGTAGAATATGCGCGAGCAGAACGCGTTGCAGGAAGCACAAAGTTCAATGGATGGAAGCTATGGAACTTGG
CGCTGGAAGGGATCACTAGCTTCTCAACATTCCCGCTTCGCATGTGGACCTATATTGGGTTATTTATTGCATGTATATCA
TTTACATACGGTTCATGGATGATAATTGATAAATTAATTTTTGGTAATAATGTACCTGGATACCCTTCAATTCTTGTATC
AATATTGTTTCTTGGCGGCGTACAACTAATTGGTATTGGTGTACTTGGAGAGTACATAGGACGTATTTATATTGAAGTTA
AGCAGCGCCCAAGATATGTTTTAAAGGATCAGAAAAATGATTGCAAATAA

Protein sequence :
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPLVVSLSFTRNFGKEPALFAGL
DHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMS
REVVENIKLMPERNLFMKGVLSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYVLKDQKNDCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-119 86
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 6e-117 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_002411667.1 bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage VFG0670 Protein 1e-119 86