Gene Information

Name : ybgP (ECUMN_0795)
Accession : YP_002411553.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : putative exported chaperone, PapD family
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 848524 - 849255 bp
Length : 732 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 10049807; Product type pf : putative factor

DNA sequence :
ATGACATTTATGAAAGGACTTCCCCTTTTGTTGTTGATTGCCAGTCTGTGCAGCTACGCTGCGCTACAACCCGATCGCAC
TCGCATTGTGTTTAACGCTAATGATAAAGCCACCAGCCTACGAGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT
ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGACGATCTTCTGGTCGCCCTGCCACCGATACAACGTCTGGAACCG
AAAGCAACAACGCAGGTGCGGATAGTCAAGCAAGCCTCGACCGCGAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA
CAATATGCGTGAAATTCCTCCCTCCCCAGAAAAAAACAGCGGCCATGCCGTTCTGCAGGTCGCCATCCAGAGTCGTATCA
AGGTGTTCTGGAGACCGTCCGCGTTACGCAAGAAAGCAGGAGAAAAAGTCGAGCTACAGTTACAAGTCAGCCAGCAGGGC
AATCAACTTAACTTAAAAAACCCGACCGGCTATTACCTGACAATCGCCTACCTGGGACGAAATGAGCAAGGTGTTCTCCC
GGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACAGTAATTACAAACACCGGAAGTTATAGCGGCAGTCAGTTTTATC
TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAATTGCAACGGACATTGCCGTTTACAAGCAGTGGAG
GCGAAGAAATGA

Protein sequence :
MTFMKGLPLLLLIASLCSYAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP
KATTQVRIVKQASTAKLPGDRETLFFYNMREIPPSPEKNSGHAVLQVAIQSRIKVFWRPSALRKKAGEKVELQLQVSQQG
NQLNLKNPTGYYLTIAYLGRNEQGVLPGFKTVMVAPFSTVITNTGSYSGSQFYLGYMDDYGALRMTTLNCNGHCRLQAVE
AKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 8e-33 41
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-37 41
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 3e-37 41
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 3e-37 41
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-37 41
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-37 41
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgP YP_002411553.1 putative exported chaperone, PapD family VFG0885 Protein 4e-33 41
ybgP YP_002411553.1 putative exported chaperone, PapD family VFG1547 Protein 9e-38 41
ybgP YP_002411553.1 putative exported chaperone, PapD family VFG0896 Protein 1e-37 41