Gene Information

Name : sfmC (ECUMN_0571)
Accession : YP_002411334.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : pilin chaperone, periplasmic
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 639095 - 639787 bp
Length : 693 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 15372038, 2553674; Product type f : factor

DNA sequence : 
ATGATGACTAAAATAAAGTTATTGATGCTCATTATATTTTATTTAATCATTTCGGCCAGCGCTCATGCTGCCGGAGGGAT
CGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATG
AGCGCTTTCTGGTCAATTCATGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTT
GTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCGGCAGATCGTGAGTCTCTGTT
CTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTAT
CGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGTACACACTCAAGTTTTCGCGA
TCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTGCAAGTGGGCAGCCAAAAACT
GGGGAATGCTATGGCTGCACCCAGAGTTAATTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGA
CCGTTAATGATTATGGTTCAGTAACCCCGGTCAGAGAAGTGAACTTAAACTAA

Protein sequence : 
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLF
VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPYTLKFSR
SGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 5e-42 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sfmC YP_002411334.1 pilin chaperone, periplasmic VFG0445 Protein 1e-64 64
sfmC YP_002411334.1 pilin chaperone, periplasmic VFG0875 Protein 3e-43 49
sfmC YP_002411334.1 pilin chaperone, periplasmic VFG1644 Protein 2e-37 45
sfmC YP_002411334.1 pilin chaperone, periplasmic VFG0911 Protein 3e-37 45