Gene Information

Name : ECUMN_4880 (ECUMN_4880)
Accession : YP_002415460.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 5044639 - 5045550 bp
Length : 912 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGCGCGGGGTTTTGTCTTTTTTCACCGGGAATACATGTATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCT
CTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGAACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCA
TTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTAATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTT
CACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGTGGCCACGGTCACAGCATGGTTATCACTGACCTGCCCGGGGT
GGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCTGTACCGTGACATTCTGCCCGAACTGGACCTGGTGCTGTGGC
TGATTAAAGCCGATGACCGCGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCACCGGGGACATCAGCAGGTG
CTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGCATTCAGCCTTCTCCCGCACA
GGCACAGAACATTCGGGAGAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCCGGTTGTTGCCGTATCGGCCC
GCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTAATGACAGCACTTCCCGACCATGCCGCCAGTCCCCTGATGACC
CGCCTGCAGGACGAGCTGCGCACGGAATCTGTCCGCGCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATT
TGACACGGCGGAGAGCGTCTGTGTTGCCTCTGTTGCCCGTACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTG
CCCGCGCTGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MRGVLSFFTGNTCMNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDV
HAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQV
LFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMT
RLQDELRTESVRAQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 8e-133 99
unnamed AAL08471.1 unknown Not tested SRL Protein 5e-134 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 2e-141 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 2e-141 99
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 6e-134 99
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 5e-131 98
unnamed AAL99256.1 unknown Not tested LEE Protein 5e-132 98
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 7e-131 98
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-131 98
Z1210 NP_286745.1 histone Not tested TAI Protein 1e-131 98
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 1e-131 98
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 6e-140 98
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-138 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECUMN_4880 YP_002415460.1 hypothetical protein VFG1674 Protein 4e-133 99
ECUMN_4880 YP_002415460.1 hypothetical protein VFG1062 Protein 3e-134 99
ECUMN_4880 YP_002415460.1 hypothetical protein VFG0654 Protein 3e-131 98