Gene Information

Name : ECUMN_4868 (ECUMN_4868)
Accession : YP_002415449.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 5035048 - 5036433 bp
Length : 1386 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTAAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACCGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCAGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGCGCCTTCCGGGTTATCCGGACGGTACGGGAAAAACATGCCTGTACTCAGTGC
GATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGCT
GACCTCGAAGTATGCAGAGCACACCCCGCTGTATTGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGTT
CACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGACT
GACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGTG
GGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAAG
GCATCCATCCGCAGACTCATCTTGCTTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTAT
CGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTC
AGCACTGACGGAAGAAGCCCTAGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAGC
AGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACC
CTGTTCTTCGGCTCTGGCCATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGACGT
GGATCCAGAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGCAGACTGGCCGGTCAACCGGGTCAGCGAACTGCTTCCGT
GGCGCATAGCACTGCCAGCTGAATAA

Protein sequence :
MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQLDKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTL
TGRVYDPAVQRPLRQTRTRKPFPESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
DAIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSGWVDACCRLLSPLEEALHGYVMT
DGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNAGSALAPAVWFAYSPDRKGIHPQTHLACFSGVLQADAYAGFNELY
RNGGITEAACWAHARRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLESWLREKMKT
LFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSELLPWRIALPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08460.1 unknown Not tested SRL Protein 0.0 99
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 7e-162 99
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 0.0 97
unnamed AAC31494.1 L0015 Not tested LEE Protein 0.0 97
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 0.0 97
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 0.0 97
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 0.0 97
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 0.0 97
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 0.0 97
tnp AEA34686.1 transposase Not tested Not named Protein 0.0 97
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 0.0 97
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-163 96
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 0.0 95
unnamed AAL57570.1 unknown Not tested LEE Protein 0.0 95
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-122 75
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-108 63
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-89 61
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 6e-101 59
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-101 58
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-99 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-99 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-102 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECUMN_4868 YP_002415449.1 putative transposase VFG1051 Protein 0.0 99
ECUMN_4868 YP_002415449.1 putative transposase VFG1516 Protein 4e-162 99
ECUMN_4868 YP_002415449.1 putative transposase VFG0793 Protein 0.0 97
ECUMN_4868 YP_002415449.1 putative transposase VFG1700 Protein 6e-123 75
ECUMN_4868 YP_002415449.1 putative transposase VFG1736 Protein 1e-111 64
ECUMN_4868 YP_002415449.1 putative transposase VFG1513 Protein 6e-90 61