Name : intB (ECUMN_4803) Accession : YP_002415396.1 Strain : Escherichia coli UMN026 Genome accession: NC_011751 Putative virulence/resistance : Unknown Product : putative integrase; KpLE2 phage-like element Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 4984262 - 4985452 bp Length : 1191 bp Strand : + Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : putative enzyme DNA sequence : ATGCATCTGCTTGTCCATCCAAATGGTTCTAAGTACTGGCGTTTGCAGTACCGTTATGAGGGAAAGCAAAAAATGCTGGC ACTTGGGGTTTATCCTGAAATCACACTAGCGGATGCCAGAGTACGTCGTGACGAGGCGCGTAAGCTGCTTGCGAATGGCG TCGATCCGGGAGACAAAAAGAAAAATGATAAGGTTGAACAGAGTAAAGCACGAACCTTTAAAGAAGTCGCGATTGAGTGG CATGGCACCAATAAAAAGTGGTCTGAAGATCACGCCCATCGTGTGCTAAAAAGTCTTGAAGATAATCTTTTTGCAGCGCT TGGTGAACGTAATATCGCTGAGTTAAAAACTCGAGATTTATTAGCACCTATTAAGGCCGTAGAAATGTCTGGACGTCTTG AAGTGGCCGCTCGTCTTCAGCAGCGCACTACAGCCATCATGCGCTATGCAGTGCAAAGTGGGTTAATTGATTATAACCCG GCACAAGAGATGGCTGGGGCGGTTGCTTCCTGTAATCGACAACATCGTCCCGCGCTTGAATTAAAGCGCATCCCTGAGTT GCTTACAAAAATAGATAGCTATACTGGTAGGCCGCTAACCCGATGGGCGATAGAACTCACTTTGCTGATCTTTATTCGGT CCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCT ATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGC AATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGA GTGAGAATACGGTAAATAGTGCGTTACGGGTCATGGGGTATGATACAAAAGTAGAGGTTTGTGGTCATGGCTTTCGAACA ATGGCCTGTAGTTCATTGGTCGAATCAGGTCTGTGGTCTCGTGATGCTGTTGAACGTCAGATGAGCCACATGGCGCGAAA TTCAGTGAGGGCCGCGTATATCCATAAAGCAGAGCATCTGGAAGAACGGCGATTGATGCTACAGTGGTGGGCCGATTTTC TGGATGTAAACAGAGAAAGGTTTATCAGTCCATTTGAATATGCAAAGATTAATAATCCATTAAAACAGTAA Protein sequence : MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEW HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP AQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRT MACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
intB | CAD42017.1 | bacteriophage P4 integrase | Not tested | PAI II 536 | Protein | 0.0 | 98 |
int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 2e-138 | 68 |
int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 2e-138 | 68 |
int | AAK00456.1 | Int | Not tested | SHI-1 | Protein | 3e-136 | 67 |
int | CAC81896.1 | integrase | Not tested | LEE II | Protein | 8e-138 | 67 |
ECO111_3718 | YP_003236059.1 | putative integrase | Not tested | LEE | Protein | 2e-136 | 67 |
int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 5e-138 | 67 |
int-phe | AAL57571.1 | CP4-like integrase | Not tested | LEE | Protein | 4e-138 | 67 |
int | AAL51028.1 | CP4-like integrase | Not tested | LEE | Protein | 4e-138 | 67 |
Z4313 | NP_289539.1 | pathogenicity island integrase | Not tested | OI-122 | Protein | 3e-137 | 67 |
int-phe | AAL60261.1 | Int-phe | Not tested | LEE | Protein | 4e-138 | 67 |
ECO103_3550 | YP_003223418.1 | integrase | Not tested | LEE | Protein | 5e-138 | 67 |
ECO26_5300 | YP_003232178.1 | integrase | Not tested | LEE | Protein | 5e-138 | 67 |
c3556 | NP_755431.1 | prophage P4 integrase | Not tested | PAI I CFT073 | Protein | 8e-136 | 67 |
int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 1e-137 | 67 |
SF2964 | NP_708738.1 | P4-type integrase | Not tested | SHI-1 | Protein | 2e-136 | 67 |
c5216 | NP_757064.1 | prophage P4 integrase | Not tested | PAI II CFT073 | Protein | 2e-136 | 67 |
ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 4e-136 | 67 |
APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 5e-136 | 67 |
S4822 | NP_838459.1 | P4-type integrase | Not tested | SHI-1 | Protein | 2e-136 | 67 |
intP4 | CAE85151.1 | CP4 integrase protein | Not tested | PAI V 536 | Protein | 5e-138 | 67 |
ECUMN_3322 | YP_002414004.1 | integrase | Not tested | Not named | Protein | 2e-134 | 66 |
STY4821 | NP_458899.1 | integrase | Not tested | SPI-10 | Protein | 3e-112 | 59 |
SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 4e-121 | 59 |
SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 4e-121 | 59 |
APECO1_1051 | YP_853069.1 | phage integrase | Not tested | PAI IV APEC-O1 | Protein | 7e-84 | 56 |
intB | AAD37509.1 | P4-like integrase | Not tested | PAI IV 536 | Protein | 7e-97 | 55 |
int | NP_458759.1 | bacteriophage integrase | Not tested | SPI-7 | Protein | 1e-109 | 55 |
int | NP_807963.1 | bacteriophage integrase | Not tested | SPI-7 | Protein | 1e-109 | 55 |
int | CAA21384.1 | - | Not tested | HPI | Protein | 6e-107 | 55 |
int | CAA08754.1 | integrase | Not tested | HPI | Protein | 2e-107 | 55 |
int | CAB59974.1 | integrase | Not tested | HPI | Protein | 3e-108 | 55 |
int | YP_002346908.1 | integrase | Not tested | HPI | Protein | 6e-107 | 55 |
y2393 | NP_669700.1 | prophage integrase | Not tested | HPI | Protein | 6e-107 | 55 |
int2 | NP_993013.1 | integrase | Not tested | HPI | Protein | 6e-107 | 55 |
unnamed | AAD17660.1 | unknown | Not tested | HPI | Protein | 2e-103 | 53 |
unnamed | ABR13507.1 | phage integrase | Not tested | PAGI-6 | Protein | 6e-98 | 53 |
unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 1e-70 | 42 |
int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-74 | 41 |
int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-74 | 41 |
intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 3e-74 | 41 |
ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 3e-74 | 41 |
int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 1e-74 | 41 |
aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 4e-75 | 41 |
int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-75 | 41 |
S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 3e-74 | 41 |
SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 3e-74 | 41 |
int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 2e-74 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
intB | YP_002415396.1 | putative integrase; KpLE2 phage-like element | VFG1536 | Protein | 0.0 | 98 |
intB | YP_002415396.1 | putative integrase; KpLE2 phage-like element | VFG1693 | Protein | 3e-136 | 67 |
intB | YP_002415396.1 | putative integrase; KpLE2 phage-like element | VFG0626 | Protein | 9e-137 | 67 |
intB | YP_002415396.1 | putative integrase; KpLE2 phage-like element | VFG0783 | Protein | 1e-74 | 41 |
intB | YP_002415396.1 | putative integrase; KpLE2 phage-like element | VFG0598 | Protein | 1e-74 | 41 |