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Name : yghJ (ECUMN_3448) Accession : YP_002414113.1 Strain : Escherichia coli UMN026 Genome accession: NC_011751 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 3564272 - 3568834 bp Length : 4563 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1644747; Product type lp : lipoprotein DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGATACCTGATCCTGAGCCAACACCA GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTG TAATGGTGAATCCAGCGATGGCTTTACATTTACACCTGGTGAGGACGTTACTTGCGTGGCGGGTAACACGACAATTGCCA CCTTCAACACTCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCGCAAGAA CTGGCGGCTTCCGACAATAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGCGGATACAGAACA GGTTTGCCTGACGTTCTCCTCTGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGGAAG AGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCATACTTCACCGGTC GTGCCTGTCACCACGCCGGGAACAAAACCGGATCTGAACGCCTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTA TCAACCTACGGAAATCATTCTCTCCGAAGGCCGACTGGTAGATAGCCAGGGATATGGTGTTGCTGGCGTCAACTACTACA CCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTGGGGCGAAACCATCTCCTTTGGTATCGAT ACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGGGGCGAA TATTGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGACGATGTACGCAAGGTCT TTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAACGGTGCGACGCTGGATGAAGGTGAGCAA GTTGTTAATCTGCCAAACGAATTTATTGAGCAGTTTAAGACGGGTCAAGCCAAAGAGATCGATACCGCGATTTGTGCGAA AACCGACGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCGTTATTA ACAAGCTGTGGGGTGTGGATACAAGTTACAAATCTGTCAGCAAGTTCCATGTATTCCATGACTCTACCAACTTCTATGGC AGCACCGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCATTCCCGATTCTGATGGCGCGTAATGATAA AAACTACTGGCTGGCCTTCGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGTACATTACGGAAGCGCCTTCCATTG TGCGCCCGGAAAACGTGACTCGCGAAACTGCCACCTTCAACCTGCCGTTTATCTCGCTGGGGCAAGTCGGCAAAGGTAAG CTGATGGTTATCGGTAACCCGCACTACAACAGCATTCTGCGCTGTCCGAACGGTTACAGCTGGGAAGGCGGTGTTGATAA AAACGGTCAGTGTACGCGTAACAGTGATTCTAATGATATGAAGCACTTTATGCAGAACGTGTTGCGCTATCTGTCCAACG ATAAATGGACGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTCAAACGTCATGGTCAG GTTACAGGAAACAGTGCTGAGTTCGGCTTCCATCCGGATTTTGCGGGTATCTCCGTTGAGCATTTAAGTAGCTATGGCGA TCTCGATCCGCAGAAAATGCCGCTGCTGATCCTTAACGGCTTTGAGTATGTGACTCAGGTGGGGGGCGATCCCTATGCAG TGCCTCTGCGTGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGATTTGATCGCCTATATGAACAAAGGT GGCTCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGCTTTGTGCGTCTGCTGGATGC CGCAGGCCTGTCAATGGCACTGAACAAGTCGGTGGTGAATAACGATCCGCAGGGTTATCCAGACCGCGTGCGCCAGCGTC GAGCGACTGGCATTTGGGTTTATGAACGTTATCCGGTTGTGGAGGGTGAGCTGCCGTACACCATTGATTCCAAAACAGGA AAAGTTACCTGGAAATATCAGATTGATAACAAGCCTGATAAGAAACCGAAACTGGAAGTAGCCAGCTGGCAAGAAGAGGT TGATGGTAAACAGGTAACTCAATTCGCCTTTATCGATGAAGCCGACCACAAAACGACTGAATCTCTGGATGCTGCGAAGA AGAAAATTCTGGAAAAATTCAAGGGATTAGAGGAGTGTAAGGACTCGACATATCACTACGAAATCAACTGCCTGGAATAC CGTCCTGGCACGAACGTTCCGGTTACTGGTGGCATGTATGTTCCGCGCTATACGCAACTGAATCTCAGCGCCGACACTGC AAAAGCGATGGTGCAGGCGGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGACCAATG GTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAATGAAATT GAATACAGCTATGACAGCAGCAAGGAAGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGCCAACGA TGCCTATACTGGCGGCACGCAGTGTTCTGATGAGCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGCGAGAAGA GCGTTAATAAAGCGGGCATGATGAACCCCAGCTATCCGCTCAACTATATGGAAAAACCGCTGACGCGCCTGATGCTGGGT CGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCGGTATCGGCAGAAGGTGAGAAGGTTAC TGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCGGGTAACATGCAGTCTACTGGCCTATGGGCTCCGGCTC AGAAAGAGGTCACCATTGAGTCTTCTGCATCAGTTCCTGTGACTGTCACCGTGGCGCTGGCCGACGATCTGACCGGACGC GAGAAGCATGAAGTCGCGCTGAACCGTCCGCCAAAAGTGACGAAAACCTATGATCTGAAAGCCAATGATAAGGTGACCTT CAAGGTGCCTTACGGTGGTCTGATTTATATCAAGGGCAACAGCCCAAAGAATGAGTCAGCCGAATTCACCTTTACTGGTG TGGTAAAAGCGCCGTTCTATAAAGACGGCGAATGGAAAAACGCTCTGAACTCCCCTGCGCCGCTGGGCGAGCTGGAATCA GACGCTTTCGTTTATACCACGCCGAAGAAGAACCTTGAGGCCAGCAATTTCACTGGTGGTGTAGCAGAATTCGCTAAAGA TCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTAATGATGAAGACGGTAAGCACCGGATGTTTACCTATA AAAACTTGACGGGGCACAAGCATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCTGGTTATCCGGTA ATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCACGAAGTTGG TCACAACGCCGCCGAAACGCCGCTGACTGTTCCTGGCGCAACTGAAGTAGCGAACAACGTGCTGGCGCTGTACATGCAGG ATCGCTATCTCGGCAAGATGAACCGTGTCGCTGACGACATTACCGTCGCGCCGGAATATCTGGAGGAGAGCAACGGTCAG GCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAAGAGTGGGCAGAGAAAAACTTTGATAT CAAGACGTGGTATCCAGATGGCAATCTGCCAGCGTTCTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGT TGATGCATCGTAAAGCACGCGGCGATGAGGTTGGCAAAACCAAGTTTGGCGAAAGAAATTACTGTGCCGAATCCAACGGT AACGCTGCCGACACGCTGATGCTGTGTGCATCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCC GGGCGCGAATGCTTACCAGTTGCCGGGAGCGAGCGAGATGAACTTCGAGGGCGGTGTGAGCCAGTCGGCTTACGAGACGC TGGCGGCGCTTAATCTGCCGAAACCGCAGCAAGGGCCGGAAACCATTAATCAGGTTACCGAGCATAAGATGTCAGCTGAG TAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTP EPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQE LAASDNKKSNAVSLVTSSNSCPADTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPV VPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGID TFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGEQ VVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTSYKSVSKFHVFHDSTNFYG STGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGKGK LMVIGNPHYNSILRCPNGYSWEGGVDKNGQCTRNSDSNDMKHFMQNVLRYLSNDKWTPDAKASMTVGTNLDTVYFKRHGQ VTGNSAEFGFHPDFAGISVEHLSSYGDLDPQKMPLLILNGFEYVTQVGGDPYAVPLRADTSKPKLTQQDVTDLIAYMNKG GSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRATGIWVYERYPVVEGELPYTIDSKTG KVTWKYQIDNKPDKKPKLEVASWQEEVDGKQVTQFAFIDEADHKTTESLDAAKKKILEKFKGLEECKDSTYHYEINCLEY RPGTNVPVTGGMYVPRYTQLNLSADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNEI EYSYDSSKEDELGFKTFTEFLNCYANDAYTGGTQCSDELKKSLVDNNMIYGEKSVNKAGMMNPSYPLNYMEKPLTRLMLG RSWWDLNIKVDVEKYPGAVSAEGEKVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIESSASVPVTVTVALADDLTGR EKHEVALNRPPKVTKTYDLKANDKVTFKVPYGGLIYIKGNSPKNESAEFTFTGVVKAPFYKDGEWKNALNSPAPLGELES DAFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDGKHRMFTYKNLTGHKHRFTNDVQISIGDAHSGYPV MNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQ AWARGGAGDRLLMYAQLKEWAEKNFDIKTWYPDGNLPAFYSEREGMKGWNLFQLMHRKARGDEVGKTKFGERNYCAESNG NAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMNFEGGVSQSAYETLAALNLPKPQQGPETINQVTEHKMSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 93 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002414113.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
