Gene Information

Name : kpsT (ECUMN_3431)
Accession : YP_002414096.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : polysialic acid transport ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.38
Position : 3544835 - 3545521 bp
Length : 687 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 1856162, 8051103, 2082146; Product type e : enzyme

DNA sequence : 
ATGTTTATGATTACAATTGAAAATCTAACAAAGTCATACAGAACGCCACTCGGACGACACTATATATTTAAAGATTTAAA
TATTGCATTTCCATCAGATAAAAGCATAGCTCTCTTAGGGCGAAATGGAGCAGGTAAGTCAACTCTTTTAAGAGTTATTG
GAGGCATTGATAGACCAGATAAAGGTACTGTAATTACGGATAAAACAATTTCTTGGCCTGTTGGATTGTCTGGAGGTTTT
CAGGGGAGTTTAACTGGGCGAGAAAATGTCAAGTTTGTTGCTCGATTATACTCAAAAGCAAATGAATTAAAAAATAAAAT
TGAGTTTGTAGAAGAGTTTTCTGAATTAGGGAAATATTTTGATATGCCAATCAAAACCTACTCATCAGGGATGAGATCAC
GGCTTGGTTTTGGTCTAAGCATGGCATTTAATTTTGATTATTATCTTGTTGATGAAATTACTGCAGTTGGTGATGCTAGA
TTTAAAGAAAAATGTGCTAAACTTTTTAAAGCAAAGCATTCTGAATTTAATTTCATTATGGTTTCACATAGCTTGCATTC
CTTAAAAGAGTTTTGTGATGTTGCTATATATTTAGGTAGAAACAACATGGTTTACTATTTTGATGATGTTGATTATGCGA
TTAAACAATATTTGATTGATGAAAAAATAAATCCACGGTCAAATTAA

Protein sequence : 
MFMITIENLTKSYRTPLGRHYIFKDLNIAFPSDKSIALLGRNGAGKSTLLRVIGGIDRPDKGTVITDKTISWPVGLSGGF
QGSLTGRENVKFVARLYSKANELKNKIEFVEEFSELGKYFDMPIKTYSSGMRSRLGFGLSMAFNFDYYLVDEITAVGDAR
FKEKCAKLFKAKHSEFNFIMVSHSLHSLKEFCDVAIYLGRNNMVYYFDDVDYAIKQYLIDEKINPRSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 7e-77 76
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-75 71
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-44 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_002414096.1 polysialic acid transport ATP-binding protein VFG1449 Protein 1e-75 71
kpsT YP_002414096.1 polysialic acid transport ATP-binding protein VFG0258 Protein 4e-45 46
kpsT YP_002414096.1 polysialic acid transport ATP-binding protein VFG0696 Protein 5e-45 46
kpsT YP_002414096.1 polysialic acid transport ATP-binding protein VFG2563 Protein 4e-42 43