Gene Information

Name : papI (ECUMN_3341)
Accession : YP_002414019.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : pap operon regulatory protein PapI
Function : -
COG functional category : K : Transcription
COG ID : COG2345
EC number : -
Position : 3462523 - 3462756 bp
Length : 234 bp
Strand : +
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 2868893, 1357526; Product type r : regulator

DNA sequence :
ATGAGTGAATATATGAAGAATGAAATACTGGAATTTCTGAACAGGCATGATGGAGGGAAAACGGCAGAAATTGCAGAGGC
GCTGGCGGTAACGGATTACCAGGCCCGCTATTACCTGTTATTACTGGAAAAAGCAGGTATGGTTCAGCGCTCACCATTAA
GACGGGGCATGGCAACATACTGGTTTCTGAAAGGAGAGAAGCAGGCGGGGCAGAGCTGTTCTTCCACAACTTAA

Protein sequence :
MSEYMKNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWFLKGEKQAGQSCSSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papI NP_755468.1 PapI protein Virulence PAI I CFT073 Protein 5e-31 100
papI YP_002414019.1 pap operon regulatory protein PapI Not tested Not named Protein 5e-31 100
fooI AAT48694.1 fimbrial regulatory protein Virulence PAI I 4787 Protein 5e-31 99
papI_2 NP_757037.1 PapI protein Virulence PAI II CFT073 Protein 6e-29 99
papI AAL67419.1 PapI Virulence PAI II CFT073 Protein 5e-31 99
prfI CAD42033.1 PrfI protein Virulence PAI II 536 Protein 7e-30 95
sfaC CAC16949.1 SfaC protein Virulence PAI III 536 Protein 1e-26 90
afaF AAK16195.1 AfaF Virulence PAI-I AL862 Protein 9e-10 50
afaF ADD91749.1 putative transcriptional regulator AfaF-VIII Not tested PAI-I AL862 Protein 9e-10 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papI YP_002414019.1 pap operon regulatory protein PapI VFG0880 Protein 1e-31 100
papI YP_002414019.1 pap operon regulatory protein PapI VFG0891 Protein 2e-29 99
papI YP_002414019.1 pap operon regulatory protein PapI VFG1552 Protein 3e-30 95
papI YP_002414019.1 pap operon regulatory protein PapI VFG1640 Protein 4e-27 90