Gene Information

Name : papH (ECUMN_3338)
Accession : YP_002414016.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : minor pilin protein PapH
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3460404 - 3460991 bp
Length : 588 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 2882856, 1357526, 2897064; Product type s : structure

DNA sequence :
ATGAGACTGCGATTCTCTGTTCCACTTTTCTTTTTTTGCTGTGTGTTTGTTCATGGTGTTTTTGCCGGTCCGTTTCCTCC
GCCCGGCATGTCCCTTCCTGAATACTGGGGAGAAGAACACGTATGGTGGGACGGCAGGGCTGCTTTTCATGGTGAGGTTG
TCAGACCTGCCTGTACTCTGGCGATGGAAGACGCCTGGCAGATTATCGATATGGGGGAAACCCCGGTTCGGGATTTACAG
AATGGTTTCTCCGGACCTGAAAGAAAATTCAGCCTCCGGCTCAGGAACTGTGAATTTAACAGTCAGGGTGGGAACCTTTT
CTCTGATTCCCGGATAAGGGTGACTTTCGATGGCGTCCGGGGGGGAACGCCGGATAAGTTTAATTTATCCGGTCAGGCAA
AAGGCATTAATCTGCAGATAGCTGATGCCAGGGGAAATATTGCCCGGGCAGGGAAAGTAATGCCTGCAATACCATTGACG
GGTAATGAAGAAGCGCTGGATTACACCCTCAGAATTGTGAGAAACGGAAAAAAACTTGAAGCCGGAAATTATTTTGCCGT
GCTGGGATTCCGGGTCGATTATGAGTGA

Protein sequence :
MRLRFSVPLFFFCCVFVHGVFAGPFPPPGMSLPEYWGEEHVWWDGRAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQ
NGFSGPERKFSLRLRNCEFNSQGGNLFSDSRIRVTFDGVRGGTPDKFNLSGQAKGINLQIADARGNIARAGKVMPAIPLT
GNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 1e-82 100
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 4e-82 99
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 4e-82 99
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 3e-82 99
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 1e-77 97
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 1e-77 97
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 2e-79 95
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 8e-58 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papH YP_002414016.1 minor pilin protein PapH VFG0894 Protein 1e-82 99
papH YP_002414016.1 minor pilin protein PapH VFG0883 Protein 1e-82 99
papH YP_002414016.1 minor pilin protein PapH VFG1549 Protein 1e-79 95