|
Name : spaQ (ECUMN_3196) Accession : YP_002413880.1 Strain : Escherichia coli UMN026 Genome accession: NC_011751 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4794 EC number : - Position : 3308961 - 3309308 bp Length : 348 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type pm : putative membrane component DNA sequence : TTGTCGCGATGGACGGTTGGACAATGTTATCGAAAGGACTCATTTTACAATATTTTGACCTATCCATTAATCCCTGAGGA AAAAAATATGGACGACATTGTTTTTGCGGGGAATAGGGCGCTGTATCTGATTTTAGTTATGTCTGCAGGACCTATTGCAG TTGCGACATTCGTTGGTTTATTGGTAGGGCTTTTTCAAACGGTAACACAGTTGCAAGAACAGACGTTGCCATTTGGCGTC AAATTATTGTGCGTAAGTATTTGCTTTTTTTTAATGAGCGGATGGTATGGTGAAAAATTATATTCGTTTGGTATCGAAAT GCTGAATTTAGCATTCGCGAGAGGATAG Protein sequence : MSRWTVGQCYRKDSFYNILTYPLIPEEKNMDDIVFAGNRALYLILVMSAGPIAVATFVGLLVGLFQTVTQLQEQTLPFGV KLLCVSICFFLMSGWYGEKLYSFGIEMLNLAFARG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3724 | NP_311751.1 | EpaQ | Not tested | LIM | Protein | 8e-35 | 100 |
| epaQ | AAZ31292.1 | EpaQ | Virulence | ETT2 | Protein | 7e-35 | 99 |
| spaQ | NP_457283.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-22 | 69 |
| spaQ | NP_806492.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-22 | 69 |
| spaQ | NP_461810.1 | needle complex export protein | Virulence | SPI-1 | Protein | 1e-22 | 69 |
| spaQ | YP_217808.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-22 | 69 |
| spaQ | AAS66866.1 | SpaQ | Not tested | SSR-2 | Protein | 2e-25 | 67 |
| ysaS | AAS66847.1 | YsaS | Not tested | SSR-1 | Protein | 3e-15 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaQ | YP_002413880.1 | surface presentation of antigens protein | VFG0550 | Protein | 3e-23 | 69 |
| spaQ | YP_002413880.1 | surface presentation of antigens protein | VFG2454 | Protein | 2e-15 | 55 |
| spaQ | YP_002413880.1 | surface presentation of antigens protein | VFG1772 | Protein | 1e-19 | 53 |
| spaQ | YP_002413880.1 | surface presentation of antigens protein | VFG0187 | Protein | 6e-08 | 44 |
