Gene Information

Name : lafK (ECUMN_0257)
Accession : YP_002411028.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : lateral flagellar RpoN-interacting regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3829
EC number : -
Position : 290561 - 291541 bp
Length : 981 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 15687208; Product type r : regulator

DNA sequence : 
ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCC
GGTGCTCATTCAGGGCGAAACCGGTGCGGGCAAAGAGTGCGTGGCGAAATATATTCACTCCGTAGCCTTTGGTGAAAACG
CGCCCTATATCGGCGTGAACTGCGCGGCGATCCCGGAAAATATGCTGGAAGCGACCTTATTTGGCTACGACAAAGGCGCA
TTTACCGGCGCAATTGCCAGCGTACCAGGCAAAATGGAACTGGCGAATAACGGCACCTTATTGCTCGATGAAATTGGCGA
TATGCCGCTGGCGCTACAGGCCAAAATATTACGCGTATTGCAGGAACAGCAGGTTGAGCGATTAGGCAGTAACCGACAAA
TTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAGCAGGAAGTCGCCGCCGGGCGTTTTCGTGAAGAT
CTCTATTATCGTCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGTGAACGCCTGAACGATATTATCCCGCTGGCAGA
GTCATTTATTAAAAAATACTCCACAGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACTCGCCGGGCGCTGCTCAATT
ACCGCTGGCCCGGCAACGTGCGCCAGCTGGAGAACGCCATTCAGCGTGGAATGATTTTAAATCGCGACGGCGTGATTTTC
CCGGATGCCTTAGGCCTGCCGGAAATAGACGTTGCCGATCACAGTGAACTGCAATGGCCTGTTCAGCCCTCCGTATCTGT
TGCGGAAACCAGCGATTTAGGCCAGGCCGGACGTAGCGCCCAGTATCAATATATCGCCGACCTGATGCGTAAATATCAGG
GCAACCGCAGCAAAATTGCCGACCTGTTAGGCATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGCAAGCAA
GGTATCGAAGTTTTCTCCTGA

Protein sequence : 
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHSVAFGENAPYIGVNCAAIPENMLEATLFGYDKGA
FTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFRED
LYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGVIF
PDALGLPEIDVADHSELQWPVQPSVSVAETSDLGQAGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMRKQ
GIEVFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 9e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lafK YP_002411028.1 lateral flagellar RpoN-interacting regulatory protein VFG1249 Protein 6e-72 48