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Name : irp (ECUMN_2269) Accession : YP_002412987.1 Strain : Escherichia coli UMN026 Genome accession: NC_011751 Putative virulence/resistance : Virulence Product : yersiniabactin-iron transporter permease YbtX Function : - COG functional category : - COG ID : - EC number : - Position : 2280380 - 2281783 bp Length : 1404 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter DNA sequence : TTGAGCAGGGTACTCATGCGCAATTGCTCTCACATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGC GTGTGGCGCGACGACGGGGTTTCCGCGTCTGGAGAGTGGGTGCATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGT TGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGTGACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCC TTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTGCCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCT GAAGTTTATTTGGGCGCCATGGATCGAGCGCTGGCGGCTTCCGCCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCC TGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGCAGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCC GATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAGGCACGGTCGCCTCCACCATTGATATCGCCAGCGACGG CTTTTGCGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGAAACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGA TGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGGCTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATT ATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGCGAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTA TGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTATTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTC TTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGCATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCG GGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACACCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGT CCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATGGCGCCGGGTCATCTGCTGCTGCCGATTCTCCAGTGTC TGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTGTCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTG CAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGGCAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGT TGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGGGCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCC GGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTGA Protein sequence : MSRVLMRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQS LPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFP DTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLI MALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAA GIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPL QAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 9e-129 | 100 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 9e-129 | 100 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 3e-148 | 100 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 2e-150 | 100 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 2e-150 | 100 |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 2e-126 | 99 |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 8e-147 | 99 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 9e-145 | 99 |
